Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00282 ATGGCGCAGAAAAGATACATCATTGAGGTTGAAAAAGCGAAGGAAGCAACAGAAGAAAAACCTTCAAGAGGACCTGCGTATCGTAGCATCTTCGCTAAAGATGGTTTTCCTCCTCCTATTCCTGGTCTTGATTGTTGCTGGGATGTTTTTCGATTGTCTGTTGAGAAATATCCAAATAATCCTATGCTTGGTAGCCGAGAGATTGTGGATGGGAAGCATGGCAAGTACAAGTGGCAAACTTACAAAGAAGTATATGACATGGTGATCAAAGTCGGAAATTCTATCCGCAGCTGTGGTTATGGAGAAGGTGTAAAATGTGGTATTTATGGTGCCAATTCTGCAGAGTGGATTATGAGCATGGAGGCTTGCAATGCTCATGGACTTCATTGTGTTCCTTTATACGATACCTTAGGTTCTGGGGCCATAGAATTTATCATATCCCATGCAGAGGTCTCAATTGCATTTGCAGAAGAAAAGAAGATACCTGAGCTATTGAAGACATTTCCAAATGCAACCAAATATCTCAAGACAATTGTGAGCTTCGGAAAGGTTACCCCTGAACAAAAGCAAGAAGTTGAAAAGTTTGGATTGGCAATATATTCGTGGACTGAGTTTTTACAATTGGGTGAAAGTCAGAGTTTTGATTTACCTGTAAAGAAAAGAAGCGATATCTGTACAATAATGTATACTAGCGGAACTACTGGTGACCCCAAGGGAGTATTGATATCCAATGAGAGTATTATTACCCTCTTAGCTGGGGTGAAGCGACTATTGGAGAGTGTCAATGAAAAATTGACTGAGAAGGATGTGTACTTATCATACCTTCCTCTCGCACACATCTTTGATAGGGTCATTGAGGAGACATTTATATGGCATGGTGGTTCAATAGGCTTCTGGCGCGGGGATGTTAAACTATTAATTGAAGATCTTGGGGAGCTAAAACCAACTATTTTCTGTGCGGTACCCCGTGTACTTGATAGAGTGTACTCAGGTTTGACACAGAAAATTTCTTCTGGAGGCTTCCTGAAGAAGACATTATTCAACTTTGCTTATTCATATAAGTTGAATAACATGAAGAAAGGACAAAACCATGCAGTAGCATCTCCACTTCTTGACAAAATTGTGTTCGATAAGGTGAAGCAAGGTTTAGGGGGTAGTGTACGTCTTATTTTGTCTGGAGCAGCACCTCTATCCTTGCATGTGGAAAGTTACTTACGGGTGGTGACTTGTGCTCATGTCCTACAAGGATATGGTCTGACTGAAACCTGTGCGGGAACCTTTGTCTCATTACCAAATGAACTAGATATGCTTGGAACAGTGGGTCCTCCTGTACCAAATGTGGATGCGTGCCTGGAATCTGTTCCTGAAATGGGTTACGATGCCCTTGCAAGCAAACCAAGAGGAGAAATTTGTGTAAAGGGCGATACCTTGTTTTCAGGGTACTACAAACGTGAAGACCTCACAAAAGAGGTTCTGGTTGATGGATGGTTCCATACAGGGGACATTGGAGAGTGGCAACCTAATGGAAGTATGAAGATTATTGATCGAAAGAAGAATATATTCAAGCTTTCACAAGGAGAATATGTTGCCGTTGAAAACCTGGAGAATATTTATAGCCAAGTTCCTTCTGTTGAATCTATATGGGTTTACGGAAACAGTTTTGAGGCCTTCCTTGTTGCTGTTGTTAACCCCAGCAAACCAGCACTTGAACATTGGGCAGAAGAAAATGGTATATCTGTGGACTTCAATTCTCTCTCCGGAGATTCTAGGGCAAAAGCTTACATACTTGACGAGCTCTCAAAGATTGGAAAGGAAAAGAAGTTGAAAGGATTTGAGTTCATAAAAGCAGTCCATCTTGACCCAGTTCCATTTGATATGGAACGTGACCTTATCACTCCAACATATAAGAAGAAGAGGCCCCAGTTGCTTAAATACTATCAGAATGTGATTGACGACATGTACAAAAGTGGAAATAAACCCCGTGCCTGA 1989 0.4128 MAQKRYIIEVEKAKEATEEKPSRGPAYRSIFAKDGFPPPIPGLDCCWDVFRLSVEKYPNNPMLGSREIVDGKHGKYKWQTYKEVYDMVIKVGNSIRSCGYGEGVKCGIYGANSAEWIMSMEACNAHGLHCVPLYDTLGSGAIEFIISHAEVSIAFAEEKKIPELLKTFPNATKYLKTIVSFGKVTPEQKQEVEKFGLAIYSWTEFLQLGESQSFDLPVKKRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNEKLTEKDVYLSYLPLAHIFDRVIEETFIWHGGSIGFWRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLTQKISSGGFLKKTLFNFAYSYKLNNMKKGQNHAVASPLLDKIVFDKVKQGLGGSVRLILSGAAPLSLHVESYLRVVTCAHVLQGYGLTETCAGTFVSLPNELDMLGTVGPPVPNVDACLESVPEMGYDALASKPRGEICVKGDTLFSGYYKREDLTKEVLVDGWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYSQVPSVESIWVYGNSFEAFLVAVVNPSKPALEHWAEENGISVDFNSLSGDSRAKAYILDELSKIGKEKKLKGFEFIKAVHLDPVPFDMERDLITPTYKKKRPQLLKYYQNVIDDMYKSGNKPRA 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00282 662 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Mepo5g00282 662 SUPERFAMILY Acetyl-CoA synthetase-like 43 655 - -
Mepo5g00282 662 Pfam AMP-binding enzyme 53 524 IPR000873 -
Mepo5g00282 662 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Mepo5g00282 662 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 654 - -
Mepo5g00282 662 Gene3D - 43 516 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00282 Mepo-Chr5 2467245 2476751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00282 3 658 Acyl Lipid Metabolism Gene Families AT4G23850 75.915 0.0 1064
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00282 K01897 - gmx:100814965 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00282 5 2467245 2476751 Mepo5g00282 5 2467245 2476751 ECH
Mepo5g00282 5 2467245 2476751 Mepo2g04721 2 55526469 55533657 PCT