Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00274 ATGGCTTCTCGCGTCGGCATCACCAATACCAATGGCACCTCTTCTCCTTCTTCTTATTTAAACTCTTCACGTTTTCTATCACCGTCTAAGAATTCTTCATTCCAAACCCAAAACGGTAGTAATTCTAATTCTGCTTCTGTCATGACTCAAAACAAAACCGTTCTAGTTACCGGCGGTGCCGGTTACATCGGTAGCCACACCGTTCTTCAACTCTTACTCGGCGGTTTCAATACGGTTATCGTTGATAATCTTGATAATTCCTCTCAAGTTTCTGTTCACAGAGTTAAGGAACTCGCTGCTCAATTTGGGAATAACCTCAATTTTCACAAGGTAGACCTCCGGGACAAGGCTTCTCTTGAGCAAATATTTGCTTCCACCAAGTTTGATGCAGTTATACATTTTGCTGGAATGAAAGCAGTGGGTGAAAGTGTGCAGAAACCGTTACTCTACTACAACAACAACTTGATTGGGACAATCACTCTTTTGGAAGTCATGGCTGCTCATGGATGCAAGAAGCTTGTGTTCTCATCTTCCGCCACTGTATATGGTTGGCCAAAGGAGGTTCCATGTACTGAAGAGTTTCCTCTGTCAGCAGCAAACCCATATGGACGAACCAAGCTCACCATTGAAGAAATCTGTCGTGATGTCAATCGTGCTGATCCAGATTGGAAAATAATGTTATTGAGATACTTCAACCCAGTGGGTGCACACCCTAGTGGTTATATTGGGGAGGATCCTCACGGGATTCCAAATAATCTTATGCCATTTATTCAGCAAGTAGCGGTTGGCAGACGTCCTGCACTGACAGTTTTTGGAAATGATTATAAAACAGTTGATGGCACTGGGGTTCGGGATTACATTCATGTTGTTGATTTAGCTGATGGCCATATTGCTGCATTGCGTAAACTAGAAGAAGCTGACATAGGTTGTGACGTTTATAACTTGGGGACAGGAAAGGGAACATCAGTTTTGGAGATGGTTAGAGCTTTTGAGAAGGCATCTGGAAAGAAAATTCCACTTGTGAAGGCTGGCCGTAGACCTGGTGATGCTGAAATTGTTTATGCATCAACAAAAAAAGCTGAAAGAGAACTTAAGTGGAAGGCAAAATATGGAATTGATGAAATGTGCCGTGATCAATGGAATTGGGCTAGGAAAAACCCTTACGGCTATGGATCTCCGGATTCCACGGATTAA 1194 0.4288 MASRVGITNTNGTSSPSSYLNSSRFLSPSKNSSFQTQNGSNSNSASVMTQNKTVLVTGGAGYIGSHTVLQLLLGGFNTVIVDNLDNSSQVSVHRVKELAAQFGNNLNFHKVDLRDKASLEQIFASTKFDAVIHFAGMKAVGESVQKPLLYYNNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLTIEEICRDVNRADPDWKIMLLRYFNPVGAHPSGYIGEDPHGIPNNLMPFIQQVAVGRRPALTVFGNDYKTVDGTGVRDYIHVVDLADGHIAALRKLEEADIGCDVYNLGTGKGTSVLEMVRAFEKASGKKIPLVKAGRRPGDAEIVYASTKKAERELKWKAKYGIDEMCRDQWNWARKNPYGYGSPDSTD 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00274 397 CDD UDP_G4E_1_SDR_e 53 382 IPR005886 GO:0003978|GO:0006012
Mepo5g00274 397 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 48 389 IPR036291 -
Mepo5g00274 397 Gene3D - 54 323 - -
Mepo5g00274 397 MobiDBLite consensus disorder prediction 1 22 - -
Mepo5g00274 397 NCBIfam UDP-glucose 4-epimerase GalE 54 388 IPR005886 GO:0003978|GO:0006012
Mepo5g00274 397 PANTHER UDP-GLUCOSE 4-EPIMERASE 50 391 - -
Mepo5g00274 397 Gene3D - 242 383 - -
Mepo5g00274 397 Pfam GDP-mannose 4,6 dehydratase 55 378 IPR016040 -
Mepo5g00274 397 FunFam UDP-glucose 4-epimerase 54 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00274 Mepo-Chr5 2396814 2405750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00274 53 367 Miscellaneous Gene Families AT4G00110 27.327 5.84e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00274 K01784 - gmx:100818509 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00274 5 2396814 2405750 Mepo5g00274 5 2396814 2405750 ECH
Mepo5g00274 5 2396814 2405750 Mepo2g04732 2 55609086 55613438 PCT