Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00037 ATGAAAATCCGATCGGTATTTGACGGCGTGGAGTTGCGTACCGAATTGTCAAAAACTGGCATCGATCCAAAGTTCATTCCAATTATATGGAAGCATATCTTTCGAAGAAACACTAATTCTGATTCTGATTCTGATTGGGAATGGGAAAAACACGTTCCTTCTTTACCTTGTTCAGCTTATTCATTCCTCCGTTCAAACTTCAAAATCCCTCTCTCTTCTTCTCTTGACTCCGTTTACCATTCTTCTGATAATGTCACTTCCAAACTTGTCATCAAGCTTCAAAATGGTGAATTTGTTGAAGCTGTGATTATGAGATATGATACTCGTTTGGGTAAATATGGCGGTCAACCCCGTTCTGGTGGTCTCAGAGCTACTTTATGTATTTCTTCTCAGGTTGGATGCAAAATGGGTTGTAAATTCTGTGCAACTGGAACTATGGGATTTAAAAGTAACTTATCCTCTGGTGAAATTGTCGAGCAGTTGGTTCATGCTTCTTCTTTTGCACAAATCCGTAATGTTGTCTTCATGGGAATGGGAGAGCCTTTGAACAACTATTCTGCTGTCGTAGAATCTGTTCGCATCATGACTGCCTCACCATTTCAGTTGTCATTGAAAAGGATTACCGTCTCAACTGTTGGCATCATTCATTCTATCAACAAGCTTCATAATGACGTGCCTGGTTTGAACTTGGCAGTCTCACTGCATGCACCAGCCCAAGACATCCGTTGCCAGATAATGCCTGCTGCCCGTGCTTTCCCTTTGGAAAAACTAATGGCTTCACTGCAAGAATATCAAAGGAAAAGTCTGCAGAAAATATTAATTGAATACATAATGCTTGATGGTGTGAATGATGAAGAGCAGCATGCCCACCTATTAGGAAAGCTGCTGGAGACATTTGAAGTGGTAGTGAACTTAATACCTTTCAACTCTATTGGTACATTAAGTCAATTCAAATCTACTAGTGAGCAGAAAGTGTCTAAGTTTCAGAAAATTTTAAGGGGTACCTATAATATTCGAACAACAGTCCGGAAGCAGATGGGTGAGGACATAAGTGGTGCGTGCGGACAATTGGTGGTTAACTTACCTGACAAGTCTCTCGGAAATGCTAACCCCCTAACGGATATAGAAGATCTTGTTATTTGA 1143 0.4059 MKIRSVFDGVELRTELSKTGIDPKFIPIIWKHIFRRNTNSDSDSDWEWEKHVPSLPCSAYSFLRSNFKIPLSSSLDSVYHSSDNVTSKLVIKLQNGEFVEAVIMRYDTRLGKYGGQPRSGGLRATLCISSQVGCKMGCKFCATGTMGFKSNLSSGEIVEQLVHASSFAQIRNVVFMGMGEPLNNYSAVVESVRIMTASPFQLSLKRITVSTVGIIHSINKLHNDVPGLNLAVSLHAPAQDIRCQIMPAARAFPLEKLMASLQEYQRKSLQKILIEYIMLDGVNDEEQHAHLLGKLLETFEVVVNLIPFNSIGTLSQFKSTSEQKVSKFQKILRGTYNIRTTVRKQMGEDISGACGQLVVNLPDKSLGNANPLTDIEDLVI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00037 380 PIRSF Cfr 7 371 IPR004383 GO:0006364|GO:0008173
Mepo5g00037 380 Pfam Radical SAM superfamily 129 286 IPR007197 GO:0003824|GO:0051536
Mepo5g00037 380 CDD Radical_SAM 133 334 - -
Mepo5g00037 380 ProSiteProfiles Radical SAM core domain profile. 120 349 IPR007197 GO:0003824|GO:0051536
Mepo5g00037 380 FunFam 23S rRNA methyltransferase 73 364 - -
Mepo5g00037 380 SFLD adenosine C2 methyltransferase (RlmN-like) 58 361 IPR004383 GO:0006364|GO:0008173
Mepo5g00037 380 SUPERFAMILY Radical SAM enzymes 125 291 - -
Mepo5g00037 380 Pfam 4Fe-4S single cluster domain 133 216 - -
Mepo5g00037 380 PANTHER 23S RRNA METHYLTRANSFERASE 8 363 IPR040072 -
Mepo5g00037 380 SFLD Radical SAM 58 361 IPR007197 GO:0003824|GO:0051536
Mepo5g00037 380 Gene3D Aldolase class I 75 364 IPR013785 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00037 - - tpra:123909522 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00037 5 372555 374871 Mepo5g00037 5 372555 374871 ECH