Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00030 ATGGCCTCATCTTCTTCTCAACCGGAAGGTGGTTTATCGGAAGAAGATTACGACTTAATCCATGGCTCTCAATCTGGTTGGGTCGATGCTCGAACTTCGTGTCATCATCTCCATTCCTTATCAAATGATCTTACCCACATTCCAACGCCTAACACTCCCTGCAACAGGTGCCAACACCCGAGTGAAAACTGGTTGTGTTTGTCGTGCAAGGACGTGCTCTGTGGCCGTTTTGTGAACAGGCATATGCTCCAGCATTTTCGTGAAACTAATCATAGTGTGGCCCTCAGTTTCAGTGATCTGTCAGTATGGTGCTTCTCCTGTGATGCTTATTTGGATGCTCAAGTTATTCAGCAATTGCGACCTGTTCATGAAGTGGTCTATATATTGAAATTTGATGAACCTCCACCAGTTGGAGCAAGCTGA 423 0.4563 MASSSSQPEGGLSEEDYDLIHGSQSGWVDARTSCHHLHSLSNDLTHIPTPNTPCNRCQHPSENWLCLSCKDVLCGRFVNRHMLQHFRETNHSVALSFSDLSVWCFSCDAYLDAQVIQQLRPVHEVVYILKFDEPPPVGAS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00030 140 SUPERFAMILY RING/U-box 32 125 - -
Mepo5g00030 140 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 28 134 IPR013083 -
Mepo5g00030 140 SMART Zf_UBP_1 53 102 IPR001607 GO:0008270
Mepo5g00030 140 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 3 138 - -
Mepo5g00030 140 Pfam Zn-finger in ubiquitin-hydrolases and other protein 54 112 IPR001607 GO:0008270
Mepo5g00030 140 ProSiteProfiles Zinc finger UBP-type profile. 32 133 IPR001607 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00030 Mepo-Chr5 333119 338477 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00030 - - aprc:113869857 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00030 5 333119 338477 Mepo5g00030 5 333119 338477 ECH