Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00029 ATGAATCCGTTGAATACTAACGATATGGATGATGAAGTAGTAAGTGCTGCTGCTGCTCCAAAACTAACCTTATTACCTCTGATTGCTCTAATATTCTACGAAGTCTCCGGCGGTCCATTCGGAGTTGAGGATTCTGTTAGAACCGGCGGTGGTCCTCTTCTATCCTTACTCGGTTTCTTGTTTTTCCCTCTCATTTGGAGTGTCCCTGAAGCTCTCATCACCGCCGAACTTGCCACTACTTTCCCTCACAACGGTGGCTATGTTCTTTGGATATCCTCTGCTTTTGGTCCCTTTTGGGGTTTTCAAGAAGGTTTTTGGAAATGGTTTAGTGGTGTTATGGACAATGCTCTTTATCCTGTTTTGTTTCTTGATTACTTGAAACATTCTTTTCCTATTTTTAACCTTATGCTAGCTCGAATTCCTGCTCTCTTAGGGATCACTTTTTCGCTTACTTATTTGAATTACAGAGGTCTTCACATTGTTGGTTTCTCTGCAGTTGTTTTAACCTTTTTTTCCCTTTTACCCTTTCTTTTTATATTCCTTCTTTCTGTTCCGAAAATCAGACTAAGGCGATGGTTTGTTGTGGATTTTAACAAGGTCAATTGGCGTGGTTACTTCAATAACATGTTTTGGAATTTGAACTATTGGGATAAGGCTAGTACTCTTGCTGGAGAGGTTGAGAATCCAAGTAAAACGTTTCCGAAAGCACTTTTTTGGGGGATGCTTTTGGTGGTCTGTTCGTATTTGATTCCGTTGCTAGCAGGAACAGGTGCTTTGAGTTCCCCTCCAACTGAATGGGCTGATGGTTATTTTGCTGAAGTTGGCATGTTGATTGGTGGTTTTTGGCTTAAACTGTGGATTCAAGCCGCGGCTGCCATGTCTAACCTTGGATTGTTTGAAGCAGAAATGAGCAGTGATGCTTTTCAACTTCTTGGAATGAGCAAGATGGGATTGCTTCCAGCTGTATTCTCATCAAGGTCTAAGTATGGAACGCCGACTATTAGCATTTTGTTCTCTGCAACTGGAGTTATCTTCTTGTCATGGATGAGCTTTCAGCAAATACTGGAGTTCCTCAATTTCTTATATGCTATAGGAATGCTTCTTGAGTTTGCAGCTTTTATAACTTTGAGATTGAAGAAGCCAAATCTTAATAGACCTTTCAGAGTTCCGTTCCAAACATTTGGGGCGGCCATGCTTTGTTTGCCTCCTGCTTTGTTACTTATTCTTGTTATGTGTCTGGCTTCTTTGAGAACGTTCTTTGTGAGTGGAGCAGTAGTAATCGTTGGATTTATCTTGTACCCTATCTTGGTTCAAGCCAAGAATAAAAGTTGGTTACTGTTTGAAACGGAACAATTGTCATCACCTTCCAATGGTTGGCATTCAATTGATTCAGAACTGGTTGGCCATGAAAACAAGGACACAGAGCTTCCTATGAGCTCACCATTGCCTATGGTGGAAGAAGAATTGTCTTTAATGCAAAGTGATTCTAATCCAAAGTAG 1500 0.4087 MNPLNTNDMDDEVVSAAAAPKLTLLPLIALIFYEVSGGPFGVEDSVRTGGGPLLSLLGFLFFPLIWSVPEALITAELATTFPHNGGYVLWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYLKHSFPIFNLMLARIPALLGITFSLTYLNYRGLHIVGFSAVVLTFFSLLPFLFIFLLSVPKIRLRRWFVVDFNKVNWRGYFNNMFWNLNYWDKASTLAGEVENPSKTFPKALFWGMLLVVCSYLIPLLAGTGALSSPPTEWADGYFAEVGMLIGGFWLKLWIQAAAAMSNLGLFEAEMSSDAFQLLGMSKMGLLPAVFSSRSKYGTPTISILFSATGVIFLSWMSFQQILEFLNFLYAIGMLLEFAAFITLRLKKPNLNRPFRVPFQTFGAAMLCLPPALLLILVMCLASLRTFFVSGAVVIVGFILYPILVQAKNKSWLLFETEQLSSPSNGWHSIDSELVGHENKDTELPMSSPLPMVEEELSLMQSDSNPK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00029 499 PIRSF AA_transporter 3 465 - -
Mepo5g00029 499 Pfam Amino acid permease 25 408 IPR002293 GO:0016020|GO:0022857|GO:0055085
Mepo5g00029 499 PANTHER POLYAMINE TRANSPORTER PUT1 17 452 IPR044566 GO:0022857
Mepo5g00029 499 Gene3D Amino acid/polyamine transporter I 21 452 - -
Mepo5g00029 499 FunFam Amino acid permease, putative 18 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00029 Mepo-Chr5 328026 330155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00029 10 477 Organic Solute Cotransporters AT3G19553 73.305 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00029 - - gmx:100776817 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00029 5 328026 330155 Mepo5g00029 5 328026 330155 ECH