Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo5g00026 | ATGGCGGTTTCAATGGGTACCGGACTATTATTATCATCTCCTCTAACTCTAAGGACTCCAAGGTTTGCGTTGTTTTCCACACCTTCTTCTACGTTGCGGATGACTCCACTCCGCACAGTTACTTCCGCCACCGTCTCTCAGCCTCCACCCACCGGAGGCAAAATTCGCGGTATCATGAAACCCAAAAAAATATCCCCCGAGATGCAAGACCTTGTCGGCCAACCCGAGATTTCCCGAACCCAAGCCCTCAAGAGCATTTGGGCCCACATTAAGGAACACAATCTTCAGAACCCTGAGAAAAAGAGGCGTATTCGCTGTGATGAGAAGCTGAAGAAGGTATTTGCAGGGAGAGATGAAGTTGATATGCTTGAGATTGCTGGCTTGATTAGCCCTCACTTCCTTAATTGA | 408 | 0.4828 | MAVSMGTGLLLSSPLTLRTPRFALFSTPSSTLRMTPLRTVTSATVSQPPPTGGKIRGIMKPKKISPEMQDLVGQPEISRTQALKSIWAHIKEHNLQNPEKKRRIRCDEKLKKVFAGRDEVDMLEIAGLISPHFLN | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo5g00026 | 135 | PANTHER | SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D | 50 | 134 | - | - | |
| Mepo5g00026 | 135 | ProSiteProfiles | SWIB/MDM2 domain profile. | 57 | 135 | IPR003121 | - | |
| Mepo5g00026 | 135 | CDD | SWIB-MDM2_like | 63 | 133 | - | - | |
| Mepo5g00026 | 135 | Pfam | SWIB/MDM2 domain | 60 | 133 | IPR003121 | - | |
| Mepo5g00026 | 135 | Gene3D | SWIB/MDM2 domain | 53 | 135 | IPR036885 | - | |
| Mepo5g00026 | 135 | SUPERFAMILY | SWIB/MDM2 domain | 53 | 135 | IPR036885 | - | |
| Mepo5g00026 | 135 | SMART | swib_2 | 58 | 135 | IPR019835 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo5g00026 | Mepo-Chr5 | 321695 | 323205 | Dispersed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | SWI/SNF-BAF60b | Mepo5g00026 | SWIB | 2.3e-28 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo5g00026 | - | - | lja:Lj1g3v0050930.1 | 161.77 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo5g00026 | 5 | 321695 | 323205 | Mepo5g00026 | 5 | 321695 | 323205 | ECH |