Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00021 ATGAGTTTGAATTCATGTAAAAGAGCATCATCATCATCTTCCAATAGATCAAAGAAGAAGCAGCAGAAAACAACTACCACCAACCAGAAAACCTTAGGCGTCGCCTGGGGGAAGAACTCTAATTCCACAAAATCCCCTTTCTCCGATGTTGCCAGTTACATGACTGAGAAGAATCGAAAACTACACAATCAGTTTAACACCGAAGAAGCTTCCACTTCTTCCGGGAACCCTATATTCGCCGGAGTTTCAATTTTTGTCGATGGTTTCACCGTTCCTTCCAGTCAGGAACTGCGTGGCTACATGTTAAAGTATGGTGGAAGATTTGAGAATTATTTCTCAAGACATCGTGTAACACATATCATCTGCACCAATCTTCCTCACACTAAACTTAAGAATCTCAGAGCTTTCAGTGCAGGGCTTCCAATTGTAAAACCAACTTGGATTTTAGATTCTGTTGCTTCTAATCGACTATTGACTTGGCCGCCTTATCAACTTCACCAGCTTTCTAATAACCAACAACCTAAACTTTCCAAATTCTTCACCTTGACAACTAGCAAAAATTCAGAGGATTCCCTTTGTCAAGTAGAGTCAGACATTGAAGATTCATTTGTTAGTGCTGGAAAATCAGAGGGTAGACATTCATCCGAAGTCGGAGATTTGGTTGTATCTAGCAGGCAAATCAGTACCCAAGCTGATGACAATGTCTTGGACAATACTGATGCAATTATGATGGAAGAGCGGCTGGCTAGTGCTGGAATTAAGTGTGATGAAGAAGATCCTATAGGAGGAAGCAATGATGCTGCTAAAGACAAGGAAACCGTTCAAGGTGAATTCGAATCTAGTTGTCAACAACCTTCTGCATCAGTTAGTAGCCTCGGATCAGACAACCATAATGTAAATGAAATTCCAAGTTCTGCTTCCACCAAGCCTTCTAAGCAGTGTCATTCAACTCTTTCCGATCCTAATTTTGTGGAAAATTATTTCAAGAACTCACGGCTACACTTCATTGGAACTTGGAGAAATCGGTATCGGAAGCGTTTTCCGACCTTGTCTACTGTGTTTGACAATGAAATTTCTAATATCAATGCCTCTAGTGTTTCTGGGAACTCAGTAGTTATCCATGTTGACATGGATTGCTTTTTTGTCTCGGTGGTTATCAGGAGCCACCCTGAATTGTTGGATAAGCCTGTAGCTGTCTGCCACTCGAATAATTCTAAGGGAACTGCTGAGATTTCCTCTGCAAACTACCCAGCACGTAGTTATGGTATTAAGGCTGGTATGTTTGTTCGAGATGCCAAGGCTCTTTGCCCCCACCTTGTTATCTTTCCATACAACTTTGAAGCTTACGAAGAAGTAGCTGATCAATTTTATAGTATATTGCATCGACATTGCAACAAAGTGCAGGCTGTAAGCTGTGATGAAGCATTTTTAGATGTCACCCATTCAAAGGTTGAAGACCCTGAACTTTTAGCGTCATCAATCAGGAAAGAGATCTATGAGACCACTGGATGTACAGCCAGTGCTGGCATAGCTGGAAACATGCTTATGTCTCGTATTGCTACTAGAACTGCTAAGCCAAACGGTCAATATCATATAACTCCAGAAAAGCTTGAAGATCATTTAAGTCAACTCCCAATTCATGCACTTCCTGGAGTAGGGCATGCTTTACAGGAAAAATTGAAGAAGCAGAATGTTCAAACGTGCGGACAATTGATGATGATTTCAAAGGTCTCACTGCAGAAGGACTATGGAATGAAAACAGGAGAAATGCTGTGGAATTATAGCAGAGGAATTGATACCCGGTTGGTTGGGGAATTTCAGGAATGCAAGTCTATTGGTGCTGATGTAAACTGGGGTGTGAGGTTCAACGATATGAAAGATTGTGAGAACTTCCTAACTAACCTTTGCAAGGAGGTCTCATTAAGATTGCAAGGTTGTGGCATGCAAGGGCGCACTTTCTCTCTCAAGATCAAAAAGAGAAGAAAAGATGCTGATGAACCTGCAAAATTTATGGGCTGTGGAGATTGTGAAAATTTGAGTCACTCAGTAACGATTCCTGTTGCTACTGATAATTTGGAAGTACTCCATAGGATAGCAAAGCAGCTTTTTGGAAATTTTTACATAGATGTCAAGGAGATTCGAGGTATTGGCCTGCAAGTTTCCAGACTTGAAAGTAGCAAGGCATCTAAGCAAGGTGCAGAAAAATATAATTTGAAATCATGGGTCACTTCAAGATCTGCAAGTATGGATAAACAGAAACATCCCATGGGTCATGACAAGCAGAATATGGATGGCACTTCCATTCATGGATGTAGAGATTTGCGAGGGTCTTCAGTTCAAAAGGACAACAACATACAAGATAACCAAGCTAGTGCTGACCGAATTTCAACACCACCTCCTTTGTGTCACCTTGACGTGGAAATTGTAAGGAATCTTCCCCCAGAAGTATTTTCAGAACTAAATGAAATTTATGGAGGGAAGTTAGTTGATTATATTACTAAAGGAAAAGGCATAAGTGAGAGTTCTAGCTCTTTACAAAGCTCACTTTTGGAAAAAGAAGCAACAAACAAGGAAAAGGAGCTTTTGGATGTGGAGCCGATTCCTCAAAAAAAGCCATTATCTGAGATTGAGGCAATGCAACATGAGGCAGAAGGAGGTGAAGTTGTACCTGATTTAGGGTCTGGGCCGTCTTGTATCGTTAATCCCAAATCAAGTTTTGAAAAAGATGATTTATTGCCTTCTTCTTTAAGTCAAGTTGACGGTTCTGTGTTACGAGAATTGCCCGAGGATTTGAAAGCAGTCATTGTTCTGCAGCTTCCTGCACACAGGAGACAGGATATTAGCTCCAATGTTGCTCTGGTTCCTCCTAGTGAAAACCATCAGGTGTCATTAGGTGTCAAGAATTCCGAGAACCTTGGATCAAATGTTCTGAATGAATGTCTTTGGGCTGGGAATCCTCCGAAATGGGTGGAGGAGTTTAAAATGAGCAGTTGCTTAATTTTAAATAAACTTGCCGAAGTTTATTATAAGTCAGGGTTGACTAGCACACTGTCATCAGTTTTACACCAAATAATATCTGAATTCCACCTGCTAAATCTAGTCCATCAGATTTCTGATGACTCTGTTAACATCATGTGTGAGCTACTGAAGCAGTATATCAAAATGAAGATTGGAAAAGATATTGAAGAGATTTATATTTGTTTTCGGCTTCTGAAAAGGTTTGCAGCAAAATCACAACTTTTCTTACAGGTGTATAATGGTGTATTTCCATACCTTCAGGAAGCTGTTGATGACAATTATGGAGGAAGTTTGTTTATAACCCCATAG 3327 0.4043 MSLNSCKRASSSSSNRSKKKQQKTTTTNQKTLGVAWGKNSNSTKSPFSDVASYMTEKNRKLHNQFNTEEASTSSGNPIFAGVSIFVDGFTVPSSQELRGYMLKYGGRFENYFSRHRVTHIICTNLPHTKLKNLRAFSAGLPIVKPTWILDSVASNRLLTWPPYQLHQLSNNQQPKLSKFFTLTTSKNSEDSLCQVESDIEDSFVSAGKSEGRHSSEVGDLVVSSRQISTQADDNVLDNTDAIMMEERLASAGIKCDEEDPIGGSNDAAKDKETVQGEFESSCQQPSASVSSLGSDNHNVNEIPSSASTKPSKQCHSTLSDPNFVENYFKNSRLHFIGTWRNRYRKRFPTLSTVFDNEISNINASSVSGNSVVIHVDMDCFFVSVVIRSHPELLDKPVAVCHSNNSKGTAEISSANYPARSYGIKAGMFVRDAKALCPHLVIFPYNFEAYEEVADQFYSILHRHCNKVQAVSCDEAFLDVTHSKVEDPELLASSIRKEIYETTGCTASAGIAGNMLMSRIATRTAKPNGQYHITPEKLEDHLSQLPIHALPGVGHALQEKLKKQNVQTCGQLMMISKVSLQKDYGMKTGEMLWNYSRGIDTRLVGEFQECKSIGADVNWGVRFNDMKDCENFLTNLCKEVSLRLQGCGMQGRTFSLKIKKRRKDADEPAKFMGCGDCENLSHSVTIPVATDNLEVLHRIAKQLFGNFYIDVKEIRGIGLQVSRLESSKASKQGAEKYNLKSWVTSRSASMDKQKHPMGHDKQNMDGTSIHGCRDLRGSSVQKDNNIQDNQASADRISTPPPLCHLDVEIVRNLPPEVFSELNEIYGGKLVDYITKGKGISESSSSLQSSLLEKEATNKEKELLDVEPIPQKKPLSEIEAMQHEAEGGEVVPDLGSGPSCIVNPKSSFEKDDLLPSSLSQVDGSVLRELPEDLKAVIVLQLPAHRRQDISSNVALVPPSENHQVSLGVKNSENLGSNVLNECLWAGNPPKWVEEFKMSSCLILNKLAEVYYKSGLTSTLSSVLHQIISEFHLLNLVHQISDDSVNIMCELLKQYIKMKIGKDIEEIYICFRLLKRFAAKSQLFLQVYNGVFPYLQEAVDDNYGGSLFITP 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00021 1108 PIRSF REV1 28 1102 IPR012112 GO:0003684|GO:0006281|GO:0016779|GO:0042276
Mepo5g00021 1108 FunFam DNA repair protein REV1 71 166 - -
Mepo5g00021 1108 ProSiteProfiles UmuC domain profile. 372 553 IPR001126 GO:0006281
Mepo5g00021 1108 Pfam impB/mucB/samB family 375 521 IPR001126 GO:0006281
Mepo5g00021 1108 Gene3D - 321 353 - -
Mepo5g00021 1108 MobiDBLite consensus disorder prediction 1 43 - -
Mepo5g00021 1108 FunFam DNA repair protein REV1 609 730 - -
Mepo5g00021 1108 Gene3D - 372 534 IPR043128 -
Mepo5g00021 1108 Pfam BRCT domain, a BRCA1 C-terminus domain 77 163 IPR001357 -
Mepo5g00021 1108 Gene3D - 389 443 - -
Mepo5g00021 1108 CDD BRCT_Rev1 78 165 - -
Mepo5g00021 1108 Gene3D - 544 598 - -
Mepo5g00021 1108 FunFam DNA repair protein REV1 389 443 - -
Mepo5g00021 1108 SMART BRCT_7 76 155 IPR001357 -
Mepo5g00021 1108 MobiDBLite consensus disorder prediction 277 315 - -
Mepo5g00021 1108 Gene3D BRCT domain 68 167 IPR036420 -
Mepo5g00021 1108 SUPERFAMILY BRCT domain 47 167 IPR036420 -
Mepo5g00021 1108 MobiDBLite consensus disorder prediction 744 779 - -
Mepo5g00021 1108 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 608 721 IPR036775 GO:0003684|GO:0006281
Mepo5g00021 1108 Gene3D - 608 732 IPR036775 GO:0003684|GO:0006281
Mepo5g00021 1108 ProSiteProfiles BRCT domain profile. 74 165 IPR001357 -
Mepo5g00021 1108 PANTHER DNA REPAIR PROTEIN REV1 1 1104 - -
Mepo5g00021 1108 MobiDBLite consensus disorder prediction 252 315 - -
Mepo5g00021 1108 SUPERFAMILY DNA/RNA polymerases 367 603 IPR043502 -
Mepo5g00021 1108 CDD PolY_Rev1 323 723 - -
Mepo5g00021 1108 FunFam DNA repair protein REV1 430 532 - -
Mepo5g00021 1108 MobiDBLite consensus disorder prediction 252 276 - -
Mepo5g00021 1108 Pfam impB/mucB/samB family C-terminal domain 610 731 IPR017961 GO:0003684|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00021 K03515 - gmx:100778409 1575.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00021 5 282132 295259 Mepo5g00021 5 282132 295259 ECH