Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00019 ATGTATGTGAGAGTCGGAGTCGGAGCCGGCGTGAGATCATGGAGTCGTCGTCAGTTGTCATCTTCGGCGGTGGCGGAAGATGGAAAATGGCTCACACTGCCACCTGTGACTGTGAGTACTACTGTAAACAGTTGTGCCCTGAAATGGGTTATTCGATGTTGCCCTCAATTACCAAAACCCCTTATCCATAAACTCTTTCGTTTAAAACAGGTTCGAATGCTCCCACAACAACAACAACAAGATGAGCATAACAAATTCAAAAGGGTAACACCTAAGGATACTTTGAACTCAGGAGATCGTATATTTCTTCCCAATTCTGTTAAACAACAAATTCCTCCCAAACATGATCAATCTCCCCTCACTCTCACTCTCACTTCTAAACAAATAAACTTCATCCGTTCTCTTGTTATCTTTAAAGATCCTCACATTCTTGTTCTAAACAAACCTCCTGGAATGCCAGTTCAGGGTGGCATTAATATCAAACTTAGTTTAGATTCTGTTGCTGCTCATTGTTTAAATTATGATTACTCTCAACCTCCTCGTTTGGTCCATAGACTTGACAGAGACTGTTCTGGAATTCTTTTCATGGGAAGAACAAAGACAAGCACCGCACTTTTGCATTCCATCTTCCGTGAAAAAACTTCCAGAGCTTCAAATGATAATAATGACTCTCATAATAGAATCCTACAAAGACGCTATTTGGCATTGGTTCTTGGATGTCCTAGACGTTCAGGCGGGGTCGTTAATGCTCCACTCGGTAAGGTGGTGGTTGACAATGGAAAATCTGATCGAATAACTATCGTTGATAATTCTGCATTACTGTCATCGCAACATGCAGTTACAGAGTACCGAGTGATTTCATCATCGTCTCATGGTTTTACATGGTTGGAGCTTTCCCCCTTAACCGGTAGAAAACACCAGCTCCGTGTCCACTGTGCTGAAGTGTTAGGTACACCGATAGTTGGGGACTACAAGTATGGACGGCAAGCTCATAAGAAGTGGGGACAGTTTGATTTGTCCAATCTGGAGGACTCAACTGAAGAACATCTCAAGGAAGAGGCACTCCCTTTTGGCCTTAATTTGAACAAGGGGAGCATCTCTGACAAACATCCTCGATTACATCTTCATTGCAAGCAAATAGTCTTGCCCAATATATCTCAAGCACTGCAAAATGTGCAATCAGTATCAGATTCAAGTTATGACCTTTCAGTAGTTGAATCACTTGAGTTGGAAGCGGATTTGCCCCCATACATGAAAAAGAGTTGGGAGGTGACAAATTCTTGA 1284 0.4229 MYVRVGVGAGVRSWSRRQLSSSAVAEDGKWLTLPPVTVSTTVNSCALKWVIRCCPQLPKPLIHKLFRLKQVRMLPQQQQQDEHNKFKRVTPKDTLNSGDRIFLPNSVKQQIPPKHDQSPLTLTLTSKQINFIRSLVIFKDPHILVLNKPPGMPVQGGINIKLSLDSVAAHCLNYDYSQPPRLVHRLDRDCSGILFMGRTKTSTALLHSIFREKTSRASNDNNDSHNRILQRRYLALVLGCPRRSGGVVNAPLGKVVVDNGKSDRITIVDNSALLSSQHAVTEYRVISSSSHGFTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGRQAHKKWGQFDLSNLEDSTEEHLKEEALPFGLNLNKGSISDKHPRLHLHCKQIVLPNISQALQNVQSVSDSSYDLSVVESLELEADLPPYMKKSWEVTNS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00019 427 CDD PseudoU_synth_RluA_like 143 336 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Mepo5g00019 427 Gene3D Pseudouridine synthase 127 394 - -
Mepo5g00019 427 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 42 424 - -
Mepo5g00019 427 Pfam RNA pseudouridylate synthase 142 313 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Mepo5g00019 427 SUPERFAMILY Pseudouridine synthase 132 384 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00019 Mepo-Chr5 258291 260911 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00019 - - gmx:100779473 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00019 5 258291 260911 Mepo5g00019 5 258291 260911 ECH