Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo5g00017 | ATGATGATGTCTGGGATTCAAGGGCAACCTCTCGAGGTTACTGTCGTTTCTTGCTTGAAATTGAAAGACACTGAATGGATTTCAAGACAAGATCCTTATGTTTGCATCGAATACGCTTCCACCAAGTTCCGAACAAGAACATGCACTGACGGCGGAAAAAACCCTGTATTTCAAGAGAAATTCATACTTCCCCTTATTGAAGGCCTTCGTGAGATCAATGTTGTTGTTTGGAACAGCAATACCGTCACCTTCGATGATTTTATCGGCACCGGAAAGGTTCAATTACACAAAGTTCTCTCTCAAGGTTTTGATGACTCTTCTTGGCCACTTCAAACTAAAACTGGCAGACACGCAGGCGAAGTAAAACTCATACTGCATTATGCCAATGCCAATGCCAATGCCAATGCCAAAGTGAATCACCAGAAACAAGCCTCCTCAAGCCATAATCCCTATACAGCAATGCCAACACCGGCAGTCCCATCATATAATCCTGTTCCTTCCTACTACCCACAACAACCACACTCTAATTATCACCATCCAACAACACCTGCTGTCGCTTATCCACAACCACCACCTTACCCTGCTGCTTCACATTCACATAATCCATCTTCTTATCCACCATCCTCAACATATCCATACCCTCGATCAGTGTCATCTCCCTATCCACCACCCTCATCATCATCACCATACCCTCCATCAGTGCCATCTCCCTATCCAACAACCTCATCATCATCACCATCACCGTACCCTCCTCCCCACTCTTATCCGCCATCTTCAGCTTATCCACCTCCATCATACCCTCCACCTGCAGGTTATCCTCCAAACACTGGATTCTACCCTCCACCGCCATATTGA | 855 | 0.4573 | MMMSGIQGQPLEVTVVSCLKLKDTEWISRQDPYVCIEYASTKFRTRTCTDGGKNPVFQEKFILPLIEGLREINVVVWNSNTVTFDDFIGTGKVQLHKVLSQGFDDSSWPLQTKTGRHAGEVKLILHYANANANANAKVNHQKQASSSHNPYTAMPTPAVPSYNPVPSYYPQQPHSNYHHPTTPAVAYPQPPPYPAASHSHNPSSYPPSSTYPYPRSVSSPYPPPSSSSPYPPSVPSPYPTTSSSSPSPYPPPHSYPPSSAYPPPSYPPPAGYPPNTGFYPPPPY | 284 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo5g00017 | 284 | Gene3D | C2 domain | 9 | 129 | IPR035892 | - | |
| Mepo5g00017 | 284 | CDD | C2 | 11 | 108 | - | - | |
| Mepo5g00017 | 284 | MobiDBLite | consensus disorder prediction | 216 | 267 | - | - | |
| Mepo5g00017 | 284 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
| Mepo5g00017 | 284 | PANTHER | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) | 3 | 246 | - | - | |
| Mepo5g00017 | 284 | MobiDBLite | consensus disorder prediction | 198 | 215 | - | - | |
| Mepo5g00017 | 284 | SMART | C2_3c | 10 | 107 | IPR000008 | - | |
| Mepo5g00017 | 284 | MobiDBLite | consensus disorder prediction | 135 | 267 | - | - | |
| Mepo5g00017 | 284 | Pfam | C2 domain | 11 | 101 | IPR000008 | - | |
| Mepo5g00017 | 284 | MobiDBLite | consensus disorder prediction | 135 | 156 | - | - | |
| Mepo5g00017 | 284 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 9 | 129 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo5g00017 | Mepo-Chr5 | 240446 | 242345 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo5g00017 | - | - | gmx:100778230 | 256.529 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo5g00017 | 5 | 240446 | 242345 | Mepo5g00017 | 5 | 240446 | 242345 | ECH |