Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g05016 ATGAATGTCGAAATGCTCCTCCAATCAAATCCATTGAACGTGTGGTCAATTTACCATTACGCCCCTACTCGTCTTGGACATTCTTCTTCGTCAAACACCCACTGTTTCGCTCTATCGCAATCACAATCACAAATAAACAACAATAACAAACATATCCACTCTTCATTCTCATCCTCAAAACCAATCATGACTTCTTCTTCTTCTTCTTCAGTGATGAGAAAGCTGGATGTTGTGTCCCCTGTTCCATCAGACATAGATATTGCTAACTCCGTTCAACCTATTCACATCTCTGAGATTGCTAATCATTTAAATCTTACTCCCAATCATTACGACCTTTATGGAAAATATAAGGCTAAGGTTCTGTTATCCGTTCTTGATGAACTGCAAGAATCAAAAGATGGGTATTATGTTGTAGTCGGAGGCATTACTCCAACTCCTCTCGGTGAAGGCAAATCTACTACCACTGTTGGTCTCTGTCAAGCACTCGGTGCTTTTCTTGATAAAAAGGTGGTCACCTGCATTCGTCAACCATCACAAGGACCTACTTTTGGAATCAAAGGAGGTGCAGCTGGTGGTGGTTATAGCCAAGTGATTCCCATGGATGAATTCAATCTTCACCTAACAGGAGATATCCATGCAATAACTGCAGCAAACAATCTTCTAGCCGCTGCAATTGATACCAGAATTTTCCATGAGTCAACACAATCAGATAAAGCTCTTTTCAACCGGTTATGCCCTCCAAATAAGGAAGGAAAAAGGAGCTTTAGTGATGTCATGTTTAGGCGTCTCAAGAAGTTTGGCATTTCAAAGACCAATCCAGATGATCTTACACCAGAAGAAGTAAATAAATTTGCTAGGCTTGATATTGACCCTGATTCTATTACATGGAGGAGAGTAATGGACATCAATGACCGGTTCTTAAGGAAAATTACTGTTGGCCAGGGACCTGATGAGAAAGGAATGGTAAGAGAAACAGCATTTGATATTTCAGTTGCTAGTGAGATAATGGCTGTTTTGGCATTGACAACATCCTTAGCTGATATGCGAGAGAGGCTAGGGAAAATGGTAATTGGAAACAGCAAGAGTGGTGACCCTGTAACTGCTGATGATCTAGGTATTGGAGGTGCTTTGACAGTTTTAATGAAGGATGCCATTCACCCTACTCTTATGCAAACTTTGGAAGGAACTCCTGTTCTTGTCCATGCAGGTCCATTTGCAAACATTGCTCATGGGAATTCTTCTATTGTGGCTGATAAGATTGCACTCAAGTTGGTTGGACCGGGTGGATTTGTAGTTACTGAAGCTGGTTTTGGTGCTGATATTGGAACTGAAAAGTTTATGAACATTAAGTGTCGGTATAGTGGTTTGACACCTCAATGTGCAATTATTGTTGCAACAATAAGGGCACTGAAAATGCATGGTGGAGGGCCAGCAGTTGTTGCTGGAAAACCTCTTGATCATGCATATTTGACCGAAAATGTTGCTTTGGTTGAAGCTGGTTGTGCGAATTTGGCAAGACATATATTAAATTCCAAAGCTTATGGTGCGAATGTTATAGTTGCTATCAACAAGTTTTCAACTGACACTGATGCCGAGCTAAATGCGGTTAAAAAAGCTGCCTTAGATGCTGGGGCTTATGATGCTGTTATATGTAGCCATCATGCCCATGGTGGCAGAGGAGCAGTAGACCTAGGCATTGCAGTTCAAAAAGCTTGTGAGAATGTGACACAGCCATTGAAGTTTCTATATCCTTTGGATATTGGTATAAAGGAGAAAATAGAGGCAATAGCAAAGTCATATGGAGCCAGCGGTGTTGAGTACTCAGAGCAGGCCGAGAAGAAGATTGAGTTATATACCAAGCAAGGATTTTCAGGACTTCCAATCTGTATGGCCAAGACTCAGTATTCTTTCTCCGACAATGCTGCAGCTAAGGGAGCTCCAACTGGGTTTATCTTACCAATAAGGGATGTAAGAGCTAGTATAGGAGCTGGATTTATTTATCCTTTGGTTGGAACAATGAGTACCATGCCTGGGTTGCCAACAAGACCGTGCTTCTATGACATTGATCTGGACACAACAACTGGACAAGTCATTGGTCTCTCTTAA 2106 0.415 MNVEMLLQSNPLNVWSIYHYAPTRLGHSSSSNTHCFALSQSQSQINNNNKHIHSSFSSSKPIMTSSSSSSVMRKLDVVSPVPSDIDIANSVQPIHISEIANHLNLTPNHYDLYGKYKAKVLLSVLDELQESKDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCIRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALFNRLCPPNKEGKRSFSDVMFRRLKKFGISKTNPDDLTPEEVNKFARLDIDPDSITWRRVMDINDRFLRKITVGQGPDEKGMVRETAFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKSGDPVTADDLGIGGALTVLMKDAIHPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGTEKFMNIKCRYSGLTPQCAIIVATIRALKMHGGGPAVVAGKPLDHAYLTENVALVEAGCANLARHILNSKAYGANVIVAINKFSTDTDAELNAVKKAALDAGAYDAVICSHHAHGGRGAVDLGIAVQKACENVTQPLKFLYPLDIGIKEKIEAIAKSYGASGVEYSEQAEKKIELYTKQGFSGLPICMAKTQYSFSDNAAAKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDIDLDTTTGQVIGLS 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g05016 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 697 IPR027417 -
Mepo4g05016 701 ProSitePatterns Formate--tetrahydrofolate ligase signature 1. 184 194 IPR020628 GO:0005524
Mepo4g05016 701 Gene3D - 232 297 - -
Mepo4g05016 701 FunFam C-1-tetrahydrofolate synthase, cytoplasmic 82 240 - -
Mepo4g05016 701 FunFam Putative formate--tetrahydrofolate ligase 588 676 - -
Mepo4g05016 701 FunFam C-1-tetrahydrofolate synthase, cytoplasmic isoform X2 315 587 - -
Mepo4g05016 701 FunFam Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like 232 297 - -
Mepo4g05016 701 CDD FTHFS 96 700 IPR000559 GO:0004329|GO:0005524
Mepo4g05016 701 Gene3D Formyltetrahydrofolate synthetase, domain 3 588 676 - -
Mepo4g05016 701 Hamap Formate--tetrahydrofolate ligase [fhs]. 81 701 IPR000559 GO:0004329|GO:0005524
Mepo4g05016 701 Pfam Formate--tetrahydrofolate ligase 83 701 IPR000559 GO:0004329|GO:0005524
Mepo4g05016 701 ProSitePatterns Formate--tetrahydrofolate ligase signature 2. 464 475 IPR020628 GO:0005524
Mepo4g05016 701 Gene3D - 336 587 IPR027417 -
Mepo4g05016 701 Gene3D - 80 231 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g05016 K01938 - gmx:100806844 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g05016 4 59311986 59316513 Mepo4g05016 4 59311986 59316513 ECH
Mepo4g05016 4 59311986 59316513 Mepo5g02917 5 35628052 35630791 ECH