Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04876 ATGGTTAGTGGTTTGTGTGCTATGGATAAGCCTCGTGAGGCTGAGAAGCTGGTTCAGGAATTTAAACAAACAGTTGGCGATGATAAGATTCAGCTTCATCCTTCTGCTTTTGAATTCAAGTCTATTTTGTATGGATATGGAAGATTGGGTTTGTTTCATGATTTGAACAGAGTTGTTGATGAAATGGAGAATAATGGGTTTGTTATTGATACTGTTTGTTATAATATGGTTCTTTCAAGTTTTGGAATTCATGGGGAGTATGTGGAAATGCTTTCTTGGCTTACTAGGATGAGGAATTCTGGTGTTCCGTTTTCTGTTAGAACTTATAATTCAGTTTCAAATTCTTGCACGACGATAATGAGGAAGGTTGTGGATTTGAATGGTTTGGTATTGTCGATTGAAGAGTTGTTGAATTCGTGTTTGGAAGGTGGGGAGGCTATGGTGGTTAAGGAGTTGCTTTCGTGGAATGTGATTTTCGATGAGGTGATGGTGTGGGATTCTAAAGAGGTGAAATTGGATTTGCATGGATTTCACTTGGGTTCGGCTTATTTGGTTATGCTTCTTTGGTTGGAGGAGATGCAGAAGAGGTTGTTGAATGCTTCAAATCATGAGATTCCTGCTGAAATCACTGTGGTATGTGGGGTTGGAAAGCATAGCAATGTGAGAGGAGAATCCCCAGTCAAAGTATTGGTTAAAGAGATGATGATGAAGATGAAAGGTCCACTCAGGATTGATAGGAAGAACACTGGCTGTTTTGTTGCCAAAGGTAAGGCTGTCAAAATTTGGTTATGTGAATTGAGGAAGCAATGA 810 0.3951 MVSGLCAMDKPREAEKLVQEFKQTVGDDKIQLHPSAFEFKSILYGYGRLGLFHDLNRVVDEMENNGFVIDTVCYNMVLSSFGIHGEYVEMLSWLTRMRNSGVPFSVRTYNSVSNSCTTIMRKVVDLNGLVLSIEELLNSCLEGGEAMVVKELLSWNVIFDEVMVWDSKEVKLDLHGFHLGSAYLVMLLWLEEMQKRLLNASNHEIPAEITVVCGVGKHSNVRGESPVKVLVKEMMMKMKGPLRIDRKNTGCFVAKGKAVKIWLCELRKQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04876 269 ProSiteProfiles Smr domain profile. 172 257 IPR002625 -
Mepo4g04876 269 Pfam PPR repeat 72 102 IPR002885 -
Mepo4g04876 269 Pfam PPR repeat 40 67 IPR002885 -
Mepo4g04876 269 Pfam PPR repeat 1 22 IPR002885 -
Mepo4g04876 269 PANTHER OS03G0856100 PROTEIN 1 124 - -
Mepo4g04876 269 SUPERFAMILY SMR domain-like 170 255 IPR036063 -
Mepo4g04876 269 SMART SMR_2 169 257 IPR002625 -
Mepo4g04876 269 NCBIfam pentatricopeptide repeat 72 103 IPR002885 -
Mepo4g04876 269 NCBIfam pentatricopeptide repeat 41 71 IPR002885 -
Mepo4g04876 269 Gene3D - 154 255 IPR036063 -
Mepo4g04876 269 Gene3D Tetratricopeptide repeat domain 1 126 IPR011990 GO:0005515
Mepo4g04876 269 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 70 104 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04876 1 146 Glycosyltransferase AT1G05670 27.397 1.28e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04876 - - mtr:11446726 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04876 4 58060882 58062409 Mepo4g04876 4 58060882 58062409 ECH