Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04603 ATGCCAAACCTCTTATTTCTTTGCCTAACTATCACCATTTGTCTTTCCACTTTCCAAACCAATTTCCTTGTACAATCCCTCACTTCATCCTCAGACATTGAAGCTCTCAAAGCCTTCAAAGCCTCAATCAAACCCTCATCCATCACACCATGGTCATGTGTAGCATCATGGAACTTCACCATTGATCCATGCTCACTCCCTCGTCGCTCATACTTCATATGTGGCTTCACCTGCACCACAGATTCCACACATATCAACCAAATCACACTAGACCCTGCAAGCTACTCAGGCTCACTCACACCACTCATCTCTAAACTCACCCAACTCATCACACTAGACCTCTCTGATAACAACTTCTTTGGCTCAATTCCTTCTTCAATCTCTTCACTTTCCAACCTCAAAACCTTAACTCTCCGTTCCAATACCTTCTCTGGTCCAATCCCACCTTCCATAACCACACTCAAATCCCTCGAATCTCTTGATCTTTCACACAATTCACTATCTGGGTCTCTCCCAAACTCCTTGAATTCTCTCACAAATCTTCACAGAATCGATTTGAGCTTCAATAAACTCACCGGTTTGATCCCAAAACTACCACCCAATTTACTAGAACTCGCAATCAAGGCAAATTCTTTATCCGGGCCTCTTCAAAAAACAACCTTTGAAGGATCTAACCAATTAGAAGTGGTGGAACTAAGCGAGAATGCTCTCACCGGAACAATCGAAACATGGTTCTTGCTTTTGTCATCACTGCAACAGGTGAATTTGGCAAACAACAGTTTCACGGGGATTCAGATCTCAAAACCCGCACGTAGTGTAGAAAGCAATCTCGTGGCATTGAACCTAGGATTTAACAGAATCCAAGGTTACGCGCCCGCGAATCTCGCTGCATATCCATTGCTGTCGTTTTTGTCGATTCGTCACAACTCGCTACGTGGCAATATACCATTGGAGTACGGACAGATCAAGAGTATGAAGAAGTTATTCTTGGATGGAAACTTCTTTGACGGCAAGCCGCCGCCAGCGTTGTTGGCTGCCGGAGCTACGGTTTCCGGTAGCTTGGGAGATAATTGTCTACAGGTATGTCCAGTTTCTTCACAGATGTGCGCGCCGGCACAGAAACCCAGCTCCGTTTGCAAACGAGGTTATCGTGGAAGAACATAA 1164 0.4493 MPNLLFLCLTITICLSTFQTNFLVQSLTSSSDIEALKAFKASIKPSSITPWSCVASWNFTIDPCSLPRRSYFICGFTCTTDSTHINQITLDPASYSGSLTPLISKLTQLITLDLSDNNFFGSIPSSISSLSNLKTLTLRSNTFSGPIPPSITTLKSLESLDLSHNSLSGSLPNSLNSLTNLHRIDLSFNKLTGLIPKLPPNLLELAIKANSLSGPLQKTTFEGSNQLEVVELSENALTGTIETWFLLLSSLQQVNLANNSFTGIQISKPARSVESNLVALNLGFNRIQGYAPANLAAYPLLSFLSIRHNSLRGNIPLEYGQIKSMKKLFLDGNFFDGKPPPALLAAGATVSGSLGDNCLQVCPVSSQMCAPAQKPSSVCKRGYRGRT 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04603 387 SMART LRR_typ_2 248 269 IPR003591 -
Mepo4g04603 387 SMART LRR_typ_2 106 130 IPR003591 -
Mepo4g04603 387 SMART LRR_typ_2 154 177 IPR003591 -
Mepo4g04603 387 SMART LRR_typ_2 178 205 IPR003591 -
Mepo4g04603 387 SUPERFAMILY L domain-like 31 340 - -
Mepo4g04603 387 Gene3D Ribonuclease Inhibitor 29 198 IPR032675 -
Mepo4g04603 387 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 380 - -
Mepo4g04603 387 Gene3D Ribonuclease Inhibitor 199 361 IPR032675 -
Mepo4g04603 387 FunFam Nuclear pore complex protein NUP107 29 197 - -
Mepo4g04603 387 PRINTS Leucine-rich repeat signature 178 191 - -
Mepo4g04603 387 PRINTS Leucine-rich repeat signature 157 170 - -
Mepo4g04603 387 Pfam Leucine Rich Repeat 109 130 IPR001611 GO:0005515
Mepo4g04603 387 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Mepo4g04603 387 Pfam Leucine rich repeat 131 191 IPR001611 GO:0005515
Mepo4g04603 387 Pfam Leucine rich repeat 200 260 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04603 Mepo-Chr4 55598158 55599775 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04603 96 359 Receptor kinase-like Gene Family AT5G06940 35.616 1.48e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04603 - - psat:127097922 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04603 4 55598158 55599775 Mepo4g04603 4 55598158 55599775 ECH