Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04532 ATGAAGTTTATGAAACTTGGTTCCAAGCCAGATACGTTTCAGACTGATGGGAACAACAATGTTAGGTATGTTGCAAGTGAGTTGGCATCAGATATTATTGTCAGTATAGGGGATACAAAGTTTTACTTACACAAGTTTCCTCTCATATCAAAGAGTTCTCACTTACAGAAGTTGATCTCCCTCAATAATGAAGAAAACATCGACGAAATTCAAATTTCAGACATTCCTGGTGGTGCAAGTGCCTTTGAGATTTGTGCTAAGTTTTGCTACGGCATGACTGTTACCCTCAATGCTTACAATGTGATTGCTACTAGATGTGCAGCAGAGTATCTTGGAATGCATGAAAACATTGAGAAAGGAAACCTTCTTTTCAAGATCGATGTTTTCCTAAGCTCTAGCATTTTTCGTAGTTGGAAGGATTCCATTATCCTTCTTCAGACTACAAAGTCTTTGTCACCATTGGATGAGGAGCAAAAGGTTGTCAACCGTTGCATTGAATCTATAGCAAATAAGGCATGCGTCGATGTGTCTAAAGTTGACTGGTCTTACACTTATAACCGAAAAAAGCTTCCGGAAGAAAATGGCTTTGAGTCCAACCAGAATGGAGTTAGAACTCGAAATGTGCCAAAAGACTGGTGGGTTGAAGATTTATGCGAACTTGAAGTTGACATGTACAAATCTGTTATAACAAATATCAAAACCAAGGAAATTCAATCTAATGATGTAATTGGTGAAGCCTTGAAAGCTTATGCTTACAGAAAGTTGCCAAATTTCAGCAAGGGTATGATCCCATGTGAGGATGTGTCGAAGCATCGGTTAATAGTTGAAACTATAGTGAAGTTGTTGCCTTCCGAGAAAGGCAGTGTTTCGTGTAGGTTCTTGGTCAAGTTATTGAAAGCTGTCATTTTTGTAGAATCAGAAGATAGGACCAGAGATGTGCTAGTAAAGAGAATTGGTCAGCAACTAGAGGAGGCTTCGGTAAATGATATTTTGATTAAAGCGCCAGATGGAGAGATTACAATGTATGATGTCGGTATAGTACATAAAATTGTAAGGGAGTTTCTTATGAAAGATCACAATTCCGAGATTGAATTGGTTGGAGGTGGCGAACTTGAAGGGATAAGAAAGCCGGGAATTTTATCAGATGCCTCTAAGCTGATGGTTGCAAAACTCATAGATGGATACCTTGCTGAAATCGCGAAGGATCCTAATTTACTATTGTCAGATTTCCTAAATCTTGCTGAGTTAGTTTCTAGCATCTCTCGTCCGTCTCATGATGGCCTTTACAGGGCTATTGACACATATTTGAAGGAGCACCCTGGTATCAGCAAAGGTGAAAAGAAGAGTATATGCCAGCTAATGGATTGCAGAAAGCTATCAGTTGATGCATCCTTGCATGCCGTGCAAAACGAGAGGCTACCGACACGTGTAATTGTGCAGGTACTACATTTCGAGCAGGTCAGAACCGCTGCGTCATCGGGTACCAGCACTCCAGACATAGCTAAAGGAATCAAAGACTTGAGCATTGGATCCAACGGTAGCTCAAGGTCGGGAACAACTAATCCGGAATATGACACTGATGGTACGGCGACAGCCGAGGAATTAAAGGCATTAAGAAAGGAACTTGCGTCGTTGAGACAAAGCAACGGAGTTGGAAACAGTTTCAAAGATGGAGATGCTAAACCAAACATGGATAAGGCTGTTATTGGAAAAATGAAAGGGTTGTTGAAGTCAAAGAAGTCTTTCATTAAGCTATGGGCAAGCAAAGGAGGACATGGTGAAAATAGTGGCTCAGATTCATCTGAGAGTATTGGTTCTGTTAACCCTGAAGAAGTTAAATCTACACCATCCAGAAATAGGAGGAATTCAGTTTCCTAA 1878 0.4047 MKFMKLGSKPDTFQTDGNNNVRYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENIDEIQISDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDSIILLQTTKSLSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKGMIPCEDVSKHRLIVETIVKLLPSEKGSVSCRFLVKLLKAVIFVESEDRTRDVLVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVHKIVREFLMKDHNSEIELVGGGELEGIRKPGILSDASKLMVAKLIDGYLAEIAKDPNLLLSDFLNLAELVSSISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGTATAEELKALRKELASLRQSNGVGNSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTPSRNRRNSVS 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04532 625 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Mepo4g04532 625 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
Mepo4g04532 625 MobiDBLite consensus disorder prediction 508 527 - -
Mepo4g04532 625 MobiDBLite consensus disorder prediction 588 625 - -
Mepo4g04532 625 SUPERFAMILY POZ domain 22 116 IPR011333 -
Mepo4g04532 625 MobiDBLite consensus disorder prediction 493 527 - -
Mepo4g04532 625 SMART BTB_4 30 128 IPR000210 GO:0005515
Mepo4g04532 625 Pfam NPH3 family 211 464 IPR027356 -
Mepo4g04532 625 MobiDBLite consensus disorder prediction 593 625 - -
Mepo4g04532 625 Pfam BTB/POZ domain 27 117 IPR000210 GO:0005515
Mepo4g04532 625 Gene3D Potassium Channel Kv1.1; Chain A 15 121 IPR011333 -
Mepo4g04532 625 PANTHER OS12G0117600 PROTEIN 25 589 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04532 Mepo-Chr4 55053275 55057104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04532 8 494 EF-hand Containing Proteins AT3G44820 34.297 1.72e-94 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04532 - - gmx:100807318 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04532 4 55053275 55057104 Mepo4g04532 4 55053275 55057104 ECH