Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04529 ATGTCTTCTTCGCTCTCACCATCACTCTCTTCTCCATTCATCCACGATTCTTCAACTACTCGCCATGGAACTAAGCTTCTTCCTTTCCCTCACGCCACCGCCACACGCAAACCGCGATGCTTCAAGTCCTTTTCTTTTAATTGCTCCCTCGACCGCATCCCCAAGCAGTTCAGAAAGGAAAATCTCAAAGATGGATTGATGGACAATTACAAGAATGCACCACAGTTTCTATATGGTCTTAATCCCTCGCAAATGGACATGTTCATAAATGCAGACAATCCTATTCATCAGATGTCTGAAAGAGTTACAGAGGAAAGCATTTCATCTGCCAAAAGTTATTTGGCTCATAGTGGGAAGGGTAGTGTATCTAGCATGGATACTAATGCATCTTCAAGACACAGCATGAGTGTTAGTATGTATAGAGGAGGTAGGGGAACAGGAAGGCCTAGAAGTTCACCACCGGATTTGCCTTCTTTGCTCTTGGATGCTCGGATATGTTATCTTGGTATGCCGATTGTACCAGCCGTGACAGAACTTATTCTGGCTCAACTTATGTGGTTGGATTATGATAACCCTGCCAAACCTGTTTATGTATATATTAATTCGTCTGGGACTCAGAATGAGAGGAATGAGACCGTGGGATCAGAAACTGATGCTTATTCCATCGCTGATATGCTTGCTTATATGAAATCTGATATCTACACTGTGAATTTGGCCATGGCGTTTGGCCAAGCAGCAATGCTTCTGTCTGTTGGAAAAAAGGGTTATCGTGCCTTGTTGCCACATTCATCCACAAAAGTATTTCTCCCGAAAGTCCACAGATCAAGTGGTTCTGTTGCAGATATGTGGATTAAGGCAAAAGAGCTGGAGGCAAATTCTGATTATTACATTGAGCTGTTGGCAAAAGGAACAGGGAAGTCAAAGGAAGAAATTGCTAAAGATGTCCAGAGGACTAGATATTTCCAACCACAGGATGCCATAGAATACGGACTCGCTGACAAAATAATGTATTCAATGGATTCAGGGGAAGGTGGTGCATATGAGAAGCGGAATATTGATGAAATACGTGCTAGAAGAGCACCGCGGAGAGGTGGTGGGAACCCTCAAGCGGCTCCTTCAGGACTTTAG 1128 0.4371 MSSSLSPSLSSPFIHDSSTTRHGTKLLPFPHATATRKPRCFKSFSFNCSLDRIPKQFRKENLKDGLMDNYKNAPQFLYGLNPSQMDMFINADNPIHQMSERVTEESISSAKSYLAHSGKGSVSSMDTNASSRHSMSVSMYRGGRGTGRPRSSPPDLPSLLLDARICYLGMPIVPAVTELILAQLMWLDYDNPAKPVYVYINSSGTQNERNETVGSETDAYSIADMLAYMKSDIYTVNLAMAFGQAAMLLSVGKKGYRALLPHSSTKVFLPKVHRSSGSVADMWIKAKELEANSDYYIELLAKGTGKSKEEIAKDVQRTRYFQPQDAIEYGLADKIMYSMDSGEGGAYEKRNIDEIRARRAPRRGGGNPQAAPSGL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04529 375 Gene3D - 124 341 - -
Mepo4g04529 375 SUPERFAMILY ClpP/crotonase 151 340 IPR029045 -
Mepo4g04529 375 Pfam Clp protease 157 337 IPR023562 -
Mepo4g04529 375 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 119 338 IPR023562 -
Mepo4g04529 375 MobiDBLite consensus disorder prediction 356 375 - -
Mepo4g04529 375 FunFam ATP-dependent Clp protease proteolytic subunit 129 340 - -
Mepo4g04529 375 PRINTS Clp protease catalytic subunit P signature 314 333 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo4g04529 375 PRINTS Clp protease catalytic subunit P signature 235 252 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo4g04529 375 PRINTS Clp protease catalytic subunit P signature 155 170 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo4g04529 375 PRINTS Clp protease catalytic subunit P signature 195 215 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo4g04529 375 MobiDBLite consensus disorder prediction 117 137 - -
Mepo4g04529 375 CDD S14_ClpP_2 155 335 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo4g04529 375 MobiDBLite consensus disorder prediction 117 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04529 Mepo-Chr4 55010551 55015023 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04529 K01358 - gmx:100820008 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04529 4 55010551 55015023 Mepo4g04529 4 55010551 55015023 ECH