Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04520 ATGAAGATTTCTGCAAAATGTTGCAATTTGTTGTTCATCACCACCTCTTTCCTTTTACTTATCTCAGGGCTAGGCGTTCATTCTTTGGACTATGATTATTTTGCTACTATTGAGTGTATGAAAGAACCTCAAAGAGCACAATATGGAGGGGGAATTATAGTAAATTCAGGATTTGATCACAACATAGAGGGCTGGACAGTATTTGGAAATGGAACAATTGAGGAACGTATATCAAATGATGGAAATAGATTCATTGTTGCCAGCAAAAGAACACAATCATTAGATAGTTTTTCACAAACGGTTCAGCTAGAGAAAGGATTGATATACACTTTTTCAGCTTGGCTTCAGCTGAGTGAAGGAAGTGACACAGTTTCTGTGGTATTTAAAACAAATGGAAGTGAACTGGTGCATGGTGGCCATGTGATAGCAAAGCATGGATGTTGGTCTCTTCTAAAAGGTGGCATAGTCGCAAACTTCTCGAGCCCGGCTGAGATTCTTTTCGAGAGCAATAATCCAAGTGTGGAACTATGGGTTGATAGTGTGTCCTTGCAACCATTTACTAAAAAGGAATGGAGATCACACCAAGACAACAACATTGAAAGGGCAGAGTACTTTGAAGAGGTACTAAGAGAGGCTTATTCTCATCCAGCAGTTCAAGGGATTATAATGTTTGCTGGTCCAGCACAAGCTGGTTTCAACAGTACAATGCTTGCAGATACAAACTTCCAAACTACTCCAACTGGACAAGTTGTGGACAATTTGATTCTTGAATGGGGAAGTGGGCCTTATACAGCAATAGCAGATAGTAGAGGAATTGTAGATATTTCATTACATCATGGAGATTATGATGTAATTGTTACACATCCTTCAAACCAATACTCCAAAAAATTGAATTTTAGTGTTAGAAAAGGATCTTCAGAGGAAAACGTCCATGTGAAAATGCATGCCTAA 951 0.387 MKISAKCCNLLFITTSFLLLISGLGVHSLDYDYFATIECMKEPQRAQYGGGIIVNSGFDHNIEGWTVFGNGTIEERISNDGNRFIVASKRTQSLDSFSQTVQLEKGLIYTFSAWLQLSEGSDTVSVVFKTNGSELVHGGHVIAKHGCWSLLKGGIVANFSSPAEILFESNNPSVELWVDSVSLQPFTKKEWRSHQDNNIERAEYFEEVLREAYSHPAVQGIIMFAGPAQAGFNSTMLADTNFQTTPTGQVVDNLILEWGSGPYTAIADSRGIVDISLHHGDYDVIVTHPSNQYSKKLNFSVRKGSSEENVHVKMHA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04520 316 Gene3D - 40 186 - -
Mepo4g04520 316 Pfam Carbohydrate binding domain 51 132 IPR003305 GO:0016798
Mepo4g04520 316 SUPERFAMILY (Trans)glycosidases 188 262 IPR017853 -
Mepo4g04520 316 PANTHER GLYCOSYL HYDROLASE 199 309 IPR044846 GO:0004553|GO:0005975
Mepo4g04520 316 SUPERFAMILY Galactose-binding domain-like 49 185 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04520 Mepo-Chr4 54925987 54928772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04520 201 301 Glycoside Hydrolase AT4G33840 41.748 3.96e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04520 - - lja:Lj5g3v2099500.1 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04520 4 54925987 54928772 Mepo4g04520 4 54925987 54928772 ECH