Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04519 ATGGCACAATATAGAGGTGGCATTATAGTAAATCCAGGATTTGATCACAACATAAATGGCTGGAAAGTGTTTGGAAATGGAACAATCGAGGAACGAGTATCTAACAATGGAAATAGATTCATTGTTGCCAGCAAGAGAACACAACCATTGGATAGTTTTTCACAGAAGGTCCAACTGAAGAAAGGAATGATATATACTTTTTCTGCTTGGTTTCAGTTGAGTGAAGGAAGTGAGTTTGTGTCAGTTGTATTTAAAATAAATGGAAGTGAATTTGTACGAGGTGGTCATGTGATAGCAAAGCATGGATGCTGGTCTCTGCTAAAAGGTGGCATAGTTGCCAACTTTTCAAGCCCTGCTGAGATTCTTTTTGAGAGCGAGAATCCAACTGTGGAACTATGGGCTGATAGTGTCTCCTTACAACCATTCACCAAGAAACAATGGAGATTACACCAAGATGACAGCGTTGAGAGGGTAAGCTAG 480 0.4 MAQYRGGIIVNPGFDHNINGWKVFGNGTIEERVSNNGNRFIVASKRTQPLDSFSQKVQLKKGMIYTFSAWFQLSEGSEFVSVVFKINGSEFVRGGHVIAKHGCWSLLKGGIVANFSSPAEILFESENPTVELWADSVSLQPFTKKQWRLHQDDSVERVS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04519 159 Gene3D - 2 142 - -
Mepo4g04519 159 Pfam Carbohydrate binding domain 7 88 IPR003305 GO:0016798
Mepo4g04519 159 SUPERFAMILY Galactose-binding domain-like 7 141 IPR008979 -
Mepo4g04519 159 PANTHER GLYCOSYL HYDROLASE 2 158 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04519 Mepo-Chr4 54921178 54922285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04519 3 158 Glycoside Hydrolase AT4G33840 53.205 1.53e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04519 - - psat:127085804 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04519 4 54921178 54922285 Mepo4g04519 4 54921178 54922285 ECH