Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04517 ATGTTTATGAATGAGTTTAACACCATCGAATACAGTCCAGACCAAGTTGCCAGCCCAGCCAATTATATCAGGAAACTTAAGGAGATTCAACAATTTCCAGGCACTACTGGAATGTTATTGTCTATAGGGGTGCAAGGCCATTTTTCACGCGGCGTGCCAAACATTGCTTACATGAGGTCAGGTCTAGATCTTCTTGGTGCAACTGGACTTCCTATATGGCTCACTGAAAGTAGTGTGGATTCTAATCCAAATCAGGCAGAGTATTTTGAAGAGATCCTAAGAGAGGCTTACTCTCATCCAGCTGTTGAAGGGATTATAATGTTTGTAGGTCCAGCACAAGCCGGTTTCATCAACACACAACTTGCAGACGCGAATTTTCAAAATACTCCAACCGGAGACGTTGTGGACAAGCTTATTGGCAAGTGGGGAACTGGAACTCATACAGCCATAGCAGATAGTAGAGGAATCATAGATATTTCACTACATCGTGGAGATTATGATGTAACTGTTACACATCCTCTAATCCAATACTCCAGAAAACTGAATATAAGTTGTGTGACAGAACCTAAGAGGGCACAATATGGGGGAGGCATTATAGTAAATCCAGGATTTGATCACAACATAAAGGGTTGGAGAGTGTTTGGAAATGGAACAATTGTGGAACGTATATCAACTGATGGAAATAGATTCATTGTTGCTCGCAATAGAACACAAATATTGGATGGTTTCTCACAGAAGGTCCAACTGAAGAAAGGAATGATATACATGTTTTCTGCTTGGTTTCAGCTCAGTGAAGGAAGTGACATTGTGTCAGTTGTATTTAAAAGAAATGGAAGTGAACTGGTGCATGGTGGCCATGTGATAGCCAAACATGGATGCTGGTCGCTCCTAAAAGGTGGCATAGTTGCAAACTTTTCAAGCCCTGCTGAGATTCTTTTTGAGAGCGAGAATCCAACTGTGGAATTATGGGTTGATAGTGTCTCCATACAACCATTCACCAGAAAGCAATGGAGATCACACCAAGATAGCAGCATTGAGAGGGTACGTAAGAGCAGGGTGAGATTCCAGGTAACTCATCCAAACGAAACAGTGTTGGAAGGAGCAACAGTTGTTATTAAACAAACAAGGGCAAATTTTCCATATGGATGTGCGATGAACCGTCATATCCTCACAAACAGTGACTACCAGAAATGGTTTGTGTCAAGATTCAAATACACAACTTTCACTAACGAGATGAAGTGGTATAGTACAGAGAAAATTCAAGGCCATGAAAACTATACTATCCCAGATGCCATGCTGAAATTTGCCAAGGAAAATGGCATATCTGTCAGAGGTCATAACATTTTGTGGGACAGTGAAAGACGTCAACCTGAATGGGATTTGTCCCTGTCTCCTGATGAATTACGAGAAGCAGCTGCAAAAAGAATGAAATCAGTGGTCTCAAGGTATAAAGGACAATTGATTGCATGGGACGTGGTAAATGAGAATGTCCACTTCCACTTTTTTGAGGACAACCTCGGCGAAAATGCCTCTGCAGTATATTATTCAGCAGCTTACCATCTTGATCCTACAACGAACATGTTCATGAATGAGTATAACACTATTGAATACAGTGGTGATAAGGATGCCAGCCCAGCCAATTATATCCGGAAACTTAAGAAGATTCAGCAGTTTCCAGGAAATGCTGGAATATCATTGGCCATAGGGTTGCAGTGCCATTTTTCAAGTGGCGTGCCAAACATTGCTTATATGAGGTCAGGTCTTGATCTTCTTGCAGCAACTGGACTCCCTATATGGCTCACAGAAACCAGTGTGGATCCTCAGCCAAATCAGGCAGAGTATTTTGAAGAGATTCTTAGAGAAGGTTACTCTCATCCTGCAGTTCAAGGAATTGTAATGTTTGTGGGTCCAGCACAGGCTGGTTTCAACAGTACACTCCTTGCAGATGCAGATTTTCAAAATACTCCAACCGGAGACGTTGTGGACAAGCTGATTCTTGAGTGGGGATCTGGGCCACATACGGCCATAGCAGACAGTAGAGGAATTATAGATATTTCATTACATCACGGGGATTATGATGTAACCGTTACACATCCTCTAACCAATTACTCCAAAACACTGAATGTAAGTGTGAGGAAAGGATTTTCTCTGGAAAGTATCCATGTGAAAATGCATGCCTAA 2181 0.4182 MFMNEFNTIEYSPDQVASPANYIRKLKEIQQFPGTTGMLLSIGVQGHFSRGVPNIAYMRSGLDLLGATGLPIWLTESSVDSNPNQAEYFEEILREAYSHPAVEGIIMFVGPAQAGFINTQLADANFQNTPTGDVVDKLIGKWGTGTHTAIADSRGIIDISLHRGDYDVTVTHPLIQYSRKLNISCVTEPKRAQYGGGIIVNPGFDHNIKGWRVFGNGTIVERISTDGNRFIVARNRTQILDGFSQKVQLKKGMIYMFSAWFQLSEGSDIVSVVFKRNGSELVHGGHVIAKHGCWSLLKGGIVANFSSPAEILFESENPTVELWVDSVSIQPFTRKQWRSHQDSSIERVRKSRVRFQVTHPNETVLEGATVVIKQTRANFPYGCAMNRHILTNSDYQKWFVSRFKYTTFTNEMKWYSTEKIQGHENYTIPDAMLKFAKENGISVRGHNILWDSERRQPEWDLSLSPDELREAAAKRMKSVVSRYKGQLIAWDVVNENVHFHFFEDNLGENASAVYYSAAYHLDPTTNMFMNEYNTIEYSGDKDASPANYIRKLKKIQQFPGNAGISLAIGLQCHFSSGVPNIAYMRSGLDLLAATGLPIWLTETSVDPQPNQAEYFEEILREGYSHPAVQGIVMFVGPAQAGFNSTLLADADFQNTPTGDVVDKLILEWGSGPHTAIADSRGIIDISLHHGDYDVTVTHPLTNYSKTLNVSVRKGFSLESIHVKMHA 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04517 726 SMART glyco_10 412 664 IPR001000 GO:0004553|GO:0005975
Mepo4g04517 726 Pfam Carbohydrate binding domain 197 275 IPR003305 GO:0016798
Mepo4g04517 726 Gene3D - 186 332 - -
Mepo4g04517 726 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 1 138 IPR001000 GO:0004553|GO:0005975
Mepo4g04517 726 Pfam Glycosyl hydrolase family 10 375 612 IPR001000 GO:0004553|GO:0005975
Mepo4g04517 726 SUPERFAMILY (Trans)glycosidases 2 145 IPR017853 -
Mepo4g04517 726 SUPERFAMILY Galactose-binding domain-like 195 331 IPR008979 -
Mepo4g04517 726 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 366 664 IPR001000 GO:0004553|GO:0005975
Mepo4g04517 726 Gene3D Glycosidases 368 668 - -
Mepo4g04517 726 Gene3D Glycosidases 1 144 - -
Mepo4g04517 726 SUPERFAMILY (Trans)glycosidases 365 671 IPR017853 -
Mepo4g04517 726 PANTHER GLYCOSYL HYDROLASE 183 713 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04517 Mepo-Chr4 54909787 54915045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04517 175 711 Glycoside Hydrolase AT4G33840 51.296 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04517 - - gmx:100777980 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04517 4 54909787 54915045 Mepo4g04517 4 54909787 54915045 ECH