Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04507 ATGTTGCAAACCCTAGTAGTTCCCGCAAGGTTTCGCTTCGGAAATCGAATATCTCTCCGTCGAAGCTTGAGCAGCATTCGTTCATTCAATTCCGATTATGGAGATCAGTCTCGTGGTGGCCTCCCTCGATTCTACTCTGAAACTCTTCCTCCTTCCAAGGGTAATGTTATTCGGGTTAAAGGCGATGAATTCTGGCACATGACTAAAGTATTGAGGCTCTCCACCAATGCTAGGGTACAGCTCTTCAATGGAAAAGGAGCTTTGGTAGAAGGATGCATACAGAACATTGACCGCACTGGACTTGATTTTGTTGCATTGACTGATCTGAAGTTAGTGCCTCCACTGAATTTTCAATTGCATGTATTTTCTGGTTTTGGTACTCTGAAGGGTGGGCGCGCTGACTGGCTTGTAGAGAAGTGTACAGAACTTGGAGCCAGTAGTGTTACTCCGCTATTGACTGAACGTTCTCCGTCAATCTCAGAAAATCGGGTGGACAGACTAGAACGTGTCATTTTAGCAGCATCTAAACAATGTCAAAGACTGCATGAAATGATCCTGAAACCTCCTGTAGAGATTGGTGATATTTTGCATCTTATTGCGCAATCAAAGCTATCTCTTGTTGCAACAGCAGAAGCAACTCCTGTTCTTAATGCATTGACGTCACCAGAAAAGGAAACTAGTGGCTTAATCGTAGTCGGGCCAGAGGGCGATTTCACTGAGAAAGAAGTGAATATGATGATGGAAGCAGGTGCTAAAGCTGTTAGTCTTGGGCCTCATCGTCTTCGGGTTGAAACTGCCACGATAGCACTTCTGACTACTGTTATGTTATGGTCCGACTCTCAGCAAACTTCTGTCTCTTGA 861 0.4472 MLQTLVVPARFRFGNRISLRRSLSSIRSFNSDYGDQSRGGLPRFYSETLPPSKGNVIRVKGDEFWHMTKVLRLSTNARVQLFNGKGALVEGCIQNIDRTGLDFVALTDLKLVPPLNFQLHVFSGFGTLKGGRADWLVEKCTELGASSVTPLLTERSPSISENRVDRLERVILAASKQCQRLHEMILKPPVEIGDILHLIAQSKLSLVATAEATPVLNALTSPEKETSGLIVVGPEGDFTEKEVNMMMEAGAKAVSLGPHRLRVETATIALLTTVMLWSDSQQTSVS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04507 286 CDD RsmE-like 119 272 IPR046886 -
Mepo4g04507 286 Gene3D - 40 285 IPR029026 -
Mepo4g04507 286 Pfam RNA methyltransferase PUA domain 60 104 IPR046887 -
Mepo4g04507 286 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E 40 284 IPR006700 GO:0006364|GO:0008168
Mepo4g04507 286 FunFam uncharacterized protein LOC106771328 isoform X2 40 285 - -
Mepo4g04507 286 NCBIfam RsmE family RNA methyltransferase 55 275 IPR006700 GO:0006364|GO:0008168
Mepo4g04507 286 SUPERFAMILY alpha/beta knot 119 278 IPR029028 -
Mepo4g04507 286 Pfam RNA methyltransferase domain 119 274 IPR046886 -
Mepo4g04507 286 SUPERFAMILY PUA domain-like 43 103 IPR015947 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04507 K09761 - gmx:100777253 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04507 4 54820221 54823891 Mepo4g04507 4 54820221 54823891 ECH