Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04503 ATGAAGCTTAGACTTAGATCATTAGAATCGAAAGAAACCCTAAAAATCGAAGTTCCTGATCCATGTTCCTTTCAACAACTCAAATTCACAATTTCTCAAACCATCTCTTCATCTTCTTCCTCTTCTATTCATCTCTCTCTCAACAGAAAAGATGAAATCAACGCCGCCTCCCCGAACGATTCCCTCCACTCAATCGGTATCGCCGGCGGTGACCTCATCTTCTACACTTTCAACCCTAACGCTTTCTCCCACAACGAAACCCTCCCTCACAAACCCAACAACCAACCCATCATTCAAAACTCGCCGGAAATCACCCCAATTGACGAAAAGTCTTCGACTTTGAACACCCCAGAAGTGAATGTTACAGAGATGGTTGATGGGTCTGATGAGGCGGCGATGACGATGGCTGTAAAGAATAATCCAGAACCTGATTTTGTGAAGAGGGTTATTAAGGAAGCGCTCGGTGATGATGTTGGTGATTTGAAGCTTTTGGTGTTTGCGGTTCATGCTATTATTCTTGAATCTGGTTTTGTTCGTGTGGACGAGGTTTCGGGTATGGCGATTAGTTGCTCTAATCTTGTTGATGATATGTCTTCTTCTTCATCAATGATATCATTGAGGTATACCCTTCCTGAGATTCTTACTAATGGTTCATCTCATGCTGTGAATTTGAAAATTCAGACCTTAGGGAATTTTGTGAATGTCTATGGTTCATTGTGTGATGATGCTGGTTCAAGGGTGCATAGGGTTTGTTTAGATAAATCTAGGTTTGCTAAGCCTTTAGAATTGATGCTGGAAAGTTCTGAATTTAATGGTAATTTTAACGATGGTGGAGATAAAGTTTTTGAATTGTGGAAGATAGTGAAAGACGGGCTTGCATTGCCACTTTTAATTGATCTTTGTGATAAAGCTGGATTAGAACTTCCACCGTGTTTTATGCGTCTTCCAATGGAGCTTAAGCTGCTGATATTTGAGTGTCTTCCCGGTGATGATTTAGCCAAAGTTTGTTGCACATGTTCTGAATTGCAGTACCTTGCCTCAAATGATGACTTGTGGAAGAAGAAGTTTGAGGAGGAGTTTGGACAAAGGAGGGTGAATGATATGAAGTTTTTTAAGAACTTGTTTGCTCAGTATCGGGCAACAAAGAAGAAATTAGAGCAACCAATTCTTTTTCAAAATCCACGTCGGTCTGGTATTATGAGGTTCTTTCAAAGGAGAAGATTTCCTAATCGTTTTGGAATGCCTCCAATTTGGGGTGGAGAGTATGATCTGCAGCCAAATTTCGGTGTAAATCTCCCTGCATACGCACCAAGGCGTACTTTCATTCCCCCGTGTCATCTAGGAGAATTTCAATGA 1356 0.4108 MKLRLRSLESKETLKIEVPDPCSFQQLKFTISQTISSSSSSSIHLSLNRKDEINAASPNDSLHSIGIAGGDLIFYTFNPNAFSHNETLPHKPNNQPIIQNSPEITPIDEKSSTLNTPEVNVTEMVDGSDEAAMTMAVKNNPEPDFVKRVIKEALGDDVGDLKLLVFAVHAIILESGFVRVDEVSGMAISCSNLVDDMSSSSSMISLRYTLPEILTNGSSHAVNLKIQTLGNFVNVYGSLCDDAGSRVHRVCLDKSRFAKPLELMLESSEFNGNFNDGGDKVFELWKIVKDGLALPLLIDLCDKAGLELPPCFMRLPMELKLLIFECLPGDDLAKVCCTCSELQYLASNDDLWKKKFEEEFGQRRVNDMKFFKNLFAQYRATKKKLEQPILFQNPRRSGIMRFFQRRRFPNRFGMPPIWGGEYDLQPNFGVNLPAYAPRRTFIPPCHLGEFQ 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04503 451 ProSiteProfiles F-box domain profile. 309 355 IPR001810 GO:0005515
Mepo4g04503 451 CDD F-box_AtSKIP22-like 311 356 - -
Mepo4g04503 451 SMART fbox_2 315 355 IPR001810 GO:0005515
Mepo4g04503 451 Gene3D - 143 312 - -
Mepo4g04503 451 Gene3D - 313 388 - -
Mepo4g04503 451 Pfam F-box-like 314 354 IPR001810 GO:0005515
Mepo4g04503 451 SUPERFAMILY F-box domain 309 369 IPR036047 GO:0005515
Mepo4g04503 451 PANTHER F-BOX PROTEIN SKIP22 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04503 Mepo-Chr4 54761320 54763236 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04503 K10293 - gmx:100796338 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04503 4 54761320 54763236 Mepo4g04503 4 54761320 54763236 ECH