Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04254 ATGGTTAAGCTAACTATAGTTGGAAAGGCAAGCGATGGATTACCTCTAGCACAAGGACTGAGATATGTAAATGAAGAAAATGGTTATCTTTCACGATACAGGCAACAAGCAGAGTTTATACTCCAAGAAATTTCAAAAGGAGTATTGACATCTTCCATGATGACCGTTCTCATTGACCATTACTGCTTCAACTTCATGGTAGAGAATGGAGTTGTTTACATTGTTTTGTGCGAGTCCACATACCCAAGAAAACTAGCATTTCATTACTTACAAGACATACAAAAAGAGTTCGAGAAGTTTGATAAAACCCTCGTAGGCAAAATCACAAGGCCATACAGCTTTGTCAAATTCGATGGTATAATTGCAAACTTTAGCAGACAATACATTGATACAAGAACTCAGGCTAACTTATCAAAACTTAATATCAACAAGAAACAAGAGTTAAACATTATTACAGAAGAAATATCCATCATTTTAGAAAGGAGGAGAATTTCAGAAACAATGGGAATGTTACCAGTTAGTCCTCAAAATTCATCCTCCTCAATATGGTGCTCCCCACGCCTTGAGGTGATTGCTATGAAATGGACACCAATTTTGATCATGGTCATTACTTCTATTGCTCTTCTAGGGGCTGGCTTAGTCCTCACAGATGACTATATTATTTCAGGCTGA 672 0.3705 MVKLTIVGKASDGLPLAQGLRYVNEENGYLSRYRQQAEFILQEISKGVLTSSMMTVLIDHYCFNFMVENGVVYIVLCESTYPRKLAFHYLQDIQKEFEKFDKTLVGKITRPYSFVKFDGIIANFSRQYIDTRTQANLSKLNINKKQELNIITEEISIILERRRISETMGMLPVSPQNSSSSIWCSPRLEVIAMKWTPILIMVITSIALLGAGLVLTDDYIISG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04254 223 Pfam Regulated-SNARE-like domain 37 118 IPR010908 -
Mepo4g04254 223 CDD Longin 5 128 IPR010908 -
Mepo4g04254 223 Gene3D Longin domain 1 129 - -
Mepo4g04254 223 ProSiteProfiles Longin domain profile. 6 121 IPR010908 -
Mepo4g04254 223 PANTHER VESICLE-TRAFFICKING PROTEIN SEC22B 1 208 IPR044565 GO:0005484|GO:0006888|GO:0006890
Mepo4g04254 223 SUPERFAMILY SNARE-like 1 128 IPR011012 -
Mepo4g04254 223 SMART Longin_2 36 120 IPR010908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04254 Mepo-Chr4 52348939 52350796 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04254 K08517 - gmx:100781527 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04254 4 52348939 52350796 Mepo4g04254 4 52348939 52350796 ECH