Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04243 ATGACATCTCTTGTCTATCTTGATCTCTCATCAAATGAGCTTTACGGTCCAATTCCCGATGCCTTTCAAAACATGACTTCCATTGAATCACTCGACCTTTCATTCAACAATTTCACTTCTATTCCATCATGGTTCAGTGACTTTGACAAACTTGCCCTTCTTGATCTTTCTGCCAATGGCCTTCATGGTCCAATTCCCGATGCCTTTCGAAACATGACTTCCATTGAATCACTCTACCTTTCTCAAAACAATTTCACTTCTATTCCATCATGGTTCAGTGACTTTGACAAACTTGCCCTTCTTGATCTTTCTGCCAATGGCCTTCATGGTCCAATTCCCGATGCCTTTCGAAACATGACTTCCATTGAATCACTCTACCTTTCTCAAAACAATTTCACATCAGTTCTGTCGTGGTTTTTCAGCTTCGGGAAACTTACTCATCTTGATCTTTCTTTTAATGGCCTTCATGGTCCAATTCCCGATGCCTTTCGAAACATGACTTTCATTGAATCCCTTGACCTTTATGGAAATAGTTTAACTTCAATTCCATCATGGCTTGCTGAGCTGAAGAGACTTAAGTACCTTGATCTTAGCTGGAATAAACTCGCTCGTATGGAATCTTCTCTATCATCAATCATAACAAACATGTGCAGCCTAAAACGTTTAGATTTATCAGAAAACAAGCTTCAAGGTGAATTAATGGGGCACTTTGAATTATCTGGATGCAATGAATATGATTTGGAGGTACTGAATTTAGAGGATAATGACATCAATGACCGCCTACCAACTTGGCTGGGGCAGCTTGAAAATCTAGAATCGCTTAATTTTGGTTCAAATTTTCTCCATGGACCTATCCCATTGTCTATAGGAAAGCTGTCAAAGTTGCAAAGGTTAGATCTATCCAATAATTCATTAGAAGGGGTCGTTTTGAGTAATATTGGAACACTTGTCAATTTAACCGACTTAGACCTTTCTTCTAATAAATTTGATGGCTCTATTCTTCAAAGCTTTGGGAAACTTTCCAATCTATATTTTCTTGATCTTTCGAAAAATTCTTTTAATGAGATTTTTCCTCAAAGTATCAGTCAACTTGTCAATTTAGTTTACTTAGATCTTTCTTCCACTAAGTTGCATGGTTCCATCCCTCAAATTCTAGGGAAACTTACACATATACATTCTCTTGATCTTTCAAACAATTCTTTTAATGGACTCATTCCTGAAAGTCTTGGTCAACTTGTCAATTTGGAACGATTAGATATTTCTTCAAACAAGTTGGATGGAATAATGTCTATGGAAAAAGGATGGCATTTAAACTTGAGGTATTTGAATCTCTCCCATAATCAAATAAGCGGTTCAATTCCAAAAAATATTGGCCATATAATGTTTTCTTTGGAAAATTTATTTCTAGGAAATAACCACTTAAATGGTTCAATACCCATCTCTTTGTGCCAAAGTCAACTGAACAATCTTGACCTTTCGAAGAATAATTTCTCTGGTGAAATTCCAAATTGTTGGGAGGATAATCAAGGATGGTCAGAGATAAATTTGTCGTCCAACAAACTAACTGGAGCATTTCCAAACTCATTTGGGAACCTTTCCACACTGTATTGGTTGCATTTGAACAATAACAACCTTCAAGGAGAGCTTCCAGTGTCTTTTAGAAATTTGTCGCAATTGTTGATTTTGGATCTTGGCGAGAATCAATTTTCTGGGAGTATACCATCATCATGGACAACAAATGCATTCCCTTTACTGCAAGTTCTTAGATTGCGACAAAACATGCTTAGTGGCAGCATTCCTTCACAACTATGTCAACTCAAATCACTAAAAATTTTGGACCTTTCAAGAAACAAATTACAAGGTTCAATACCCCAATGCATAGGAAACCTTGAAGGAATGAGATTGGGAAAATCAATATCATCATCGGTTCACGTGCAGTCGTACGAGTTAATAGTAAATGCACCTCAAATATGGTCAAATGAGTTTCTTACAGAAGTTGATGCACAACCTCCTACTGCTAGTGACGATGAATGGTCTAAACAAGATGTCACAGAAATGGTGAAAGGAATGGAACTTGAGTATACAAAAATCCTGAAACTTGTAGTCAATATGGACTTGTCACAAAATAATTTGGTTGGATTCATTCCAAAGGAAATCACATGGCTCACAGGACTGCATGGCTTGAATTTGTCAAAAAATCATTTGAAAGGAGAGATTCCTCGGTTAATAGGAGACATGAAATCGTTGGAATCCTTGGACATGTCTCATAACCAACTTTCAGGAACAATTCCAAACAGCATGTCTGATTTAACTTCACTGAGTGATTTAAACTTGTCACACAACAACCTTTCAGGGCCAATTCCCAAAGATAATCAATTTTCAACTTTTAACGAGTCTATTTTTGCTCACAACCCATACCTTTGTGGATCTCCACTCCCAAATAACTGTCCTGGTCATATTTCACATGGAACTTCTGAAATAAACGGTGATGAAGATGAAGATGGGGTAGAAAAAGTATGGTTCTACTTTGTCATAGCACTCGGCTTTGCGACTGGCTTATGGGGAGTTATTGGCACTTTGTGGTTCAAGAAGAATTGGAGACATGCTTACTTCAGATGGGTGGAAGATGTTGCTGACAAGATTTATGTCACAGTTGTAATAAAAGTGGCAAAGATGAAGAAGAATATGATAAGAAACCATAGCCACGAGTGA 2712 0.3728 MTSLVYLDLSSNELYGPIPDAFQNMTSIESLDLSFNNFTSIPSWFSDFDKLALLDLSANGLHGPIPDAFRNMTSIESLYLSQNNFTSIPSWFSDFDKLALLDLSANGLHGPIPDAFRNMTSIESLYLSQNNFTSVLSWFFSFGKLTHLDLSFNGLHGPIPDAFRNMTFIESLDLYGNSLTSIPSWLAELKRLKYLDLSWNKLARMESSLSSIITNMCSLKRLDLSENKLQGELMGHFELSGCNEYDLEVLNLEDNDINDRLPTWLGQLENLESLNFGSNFLHGPIPLSIGKLSKLQRLDLSNNSLEGVVLSNIGTLVNLTDLDLSSNKFDGSILQSFGKLSNLYFLDLSKNSFNEIFPQSISQLVNLVYLDLSSTKLHGSIPQILGKLTHIHSLDLSNNSFNGLIPESLGQLVNLERLDISSNKLDGIMSMEKGWHLNLRYLNLSHNQISGSIPKNIGHIMFSLENLFLGNNHLNGSIPISLCQSQLNNLDLSKNNFSGEIPNCWEDNQGWSEINLSSNKLTGAFPNSFGNLSTLYWLHLNNNNLQGELPVSFRNLSQLLILDLGENQFSGSIPSSWTTNAFPLLQVLRLRQNMLSGSIPSQLCQLKSLKILDLSRNKLQGSIPQCIGNLEGMRLGKSISSSVHVQSYELIVNAPQIWSNEFLTEVDAQPPTASDDEWSKQDVTEMVKGMELEYTKILKLVVNMDLSQNNLVGFIPKEITWLTGLHGLNLSKNHLKGEIPRLIGDMKSLESLDMSHNQLSGTIPNSMSDLTSLSDLNLSHNNLSGPIPKDNQFSTFNESIFAHNPYLCGSPLPNNCPGHISHGTSEINGDEDEDGVEKVWFYFVIALGFATGLWGVIGTLWFKKNWRHAYFRWVEDVADKIYVTVVIKVAKMKKNMIRNHSHE 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04243 903 SMART LRR_sd22_2 316 345 - -
Mepo4g04243 903 SMART LRR_sd22_2 142 174 - -
Mepo4g04243 903 SMART LRR_sd22_2 746 778 - -
Mepo4g04243 903 SMART LRR_sd22_2 412 433 - -
Mepo4g04243 903 SMART LRR_sd22_2 292 315 - -
Mepo4g04243 903 SMART LRR_sd22_2 436 459 - -
Mepo4g04243 903 SMART LRR_sd22_2 189 211 - -
Mepo4g04243 903 SMART LRR_sd22_2 606 632 - -
Mepo4g04243 903 SMART LRR_sd22_2 1 33 - -
Mepo4g04243 903 Pfam Leucine Rich Repeat 608 630 IPR001611 GO:0005515
Mepo4g04243 903 Pfam Leucine Rich Repeat 294 309 IPR001611 GO:0005515
Mepo4g04243 903 SUPERFAMILY RNI-like 358 794 - -
Mepo4g04243 903 Gene3D Ribonuclease Inhibitor 333 434 IPR032675 -
Mepo4g04243 903 Gene3D Ribonuclease Inhibitor 44 135 IPR032675 -
Mepo4g04243 903 Gene3D Ribonuclease Inhibitor 435 823 IPR032675 -
Mepo4g04243 903 SMART LRR_typ_2 556 580 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 461 485 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 388 411 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 340 363 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 292 312 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 1 24 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 316 339 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 72 94 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 142 165 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 770 803 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 166 188 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 25 47 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 189 212 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 119 141 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 532 555 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 606 630 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 412 434 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 746 769 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 364 387 IPR003591 -
Mepo4g04243 903 SMART LRR_typ_2 438 460 IPR003591 -
Mepo4g04243 903 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Mepo4g04243 903 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 693 816 - -
Mepo4g04243 903 PRINTS Leucine-rich repeat signature 606 619 - -
Mepo4g04243 903 PRINTS Leucine-rich repeat signature 295 308 - -
Mepo4g04243 903 SUPERFAMILY L domain-like 2 235 - -
Mepo4g04243 903 Gene3D Ribonuclease Inhibitor 239 332 IPR032675 -
Mepo4g04243 903 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 385 863 - -
Mepo4g04243 903 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 204 435 - -
Mepo4g04243 903 Gene3D Ribonuclease Inhibitor 136 238 IPR032675 -
Mepo4g04243 903 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 203 - -
Mepo4g04243 903 Gene3D Ribonuclease Inhibitor 1 43 IPR032675 -
Mepo4g04243 903 Pfam Leucine rich repeat 513 569 IPR001611 GO:0005515
Mepo4g04243 903 Pfam Leucine rich repeat 318 377 IPR001611 GO:0005515
Mepo4g04243 903 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
Mepo4g04243 903 Pfam Leucine rich repeat 390 449 IPR001611 GO:0005515
Mepo4g04243 903 Pfam Leucine rich repeat 3 61 IPR001611 GO:0005515
Mepo4g04243 903 Pfam Leucine rich repeat 724 783 IPR001611 GO:0005515
Mepo4g04243 903 SUPERFAMILY L domain-like 245 382 - -
Mepo4g04243 903 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 436 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04243 Mepo-Chr4 52263835 52266598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04243 50 881 Miscellaneous Gene Families AT1G74190 31.702 1.16e-89 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04243 - - mtr:11429201 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04243 4 52263835 52266598 Mepo4g04243 4 52263835 52266598 ECH