Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04236 ATGGTTTCACAGTGGGGAATCAAGTTCGCCGTTCATCTCATCACCGCCCATTTCGGAAAAATCGTCGCCAATGTTGCTGAAAAACTACTTAACAATGGACCTCTCACGTTGGAACTGGTTGCTCGCTACACCGAACTTTCCAATGAGCATGTTAAGAACTCATTGCTTGTCTTAATTCAACACAATTGTGTTCAAGCATTCACCGAAGTTGGTGATGAAGATGGGTCGAGAGTTGTTAAGCCGAAGTACTTGGTGTTGTTTGATAACATAATCCATCGACTGAGATTTCCAAAATTCATGGAGATTGTGTCGCAGGAACTTGATGTTAAGTGTGTAGCGATTCTTAAGGGATTGCTCCGCGATGGTAGACTTACCTTGAAACAATTGGCTGAGATGGCAAGTGAAGATAAAGAAAATGCAATGACTCCAGATGTTGTACGAGAGAGCCTTTGCAGACTTCTTAGAGCTCGATATGTTGAACGTTGCCCAGTCCCCGAGGCTACGATACTTGAAGAAAAGGGAGATGATAAGAAGAGTCGTTCTACTTCTAATAAGAAGGCCCGGGTTTTCAAAGTGCCAGAGGAACATCGTGTTGTGGAAGCTGCAAAGCGTGGGGATATGATCAGATTTTCACTTACTGCATATACAGGATGTAGTAGTGATGGAGAAACAAAGCTAGCTGATATAAGTGTTGCAGAAAATGTTGCAAAAGAGGAGTCATTTCTTTGGCGTGCAAATTTTGAGGAGTTCATACGTTATCTTAGGGACAAGGCATTGACTGAGAATGTAAGAGCACGGATGGATGATGGAGCTGCTACTGTCCTAAGTGCAATATTGAAGGCAACAAGAAATATAGATAAAAACGTGAAAATAGAACAATCAGCTCCCTGTACGCTGGATACAATTTCCTCAGAGGTGATGAAGACTGAAAATGGCCGAACTATGACCATGGATCGTGTTAAAGCTGCGCTTGTTCAGTTGGGTTGTTTAAACCAGAATATTGTTGATTTTAAGCGCATTATTCATCTGGCTCGAAATGAAGAGGTTGAGTCAATTGTGTTAAAAAGGTATGGAAGAGATGCCTACCGAATGTTCAGGCATCTGTTAAAGGAAAATCAGTTTCGTCCGACTGATCAGATTGCGGAGGCTACTCTTGTTGAGAAAAAGGAAGCTCCAAAGTTACTGTTCAAGTTATGGAGGGAAAACTACTTGCAGATGGAGAAATTAACTGTCAGCATGACATCTCAGAATGGGACATCTCCAATTTTAATGTGGAAAGTTAATCAGCCTCTGCTTTGGGAACATGTTCTAGACGAGATGTACCACGGTGCCTTAAATTTGAAACTAAGAATGGCTTTTGAGGAGGAAAAGGATGAAGAGATTTTGAATATGAGCAAGAAGACGCGTAGTGCATCGGCGCTATTGCAGAAGAAATACGATCGGCTACGAAATGTTTTGGTTCTCTTGAAATCATCATTGATGAAACTTGATGATGCTCTTATGCTTTTCCATGACTTCTGA 1521 0.4155 MVSQWGIKFAVHLITAHFGKIVANVAEKLLNNGPLTLELVARYTELSNEHVKNSLLVLIQHNCVQAFTEVGDEDGSRVVKPKYLVLFDNIIHRLRFPKFMEIVSQELDVKCVAILKGLLRDGRLTLKQLAEMASEDKENAMTPDVVRESLCRLLRARYVERCPVPEATILEEKGDDKKSRSTSNKKARVFKVPEEHRVVEAAKRGDMIRFSLTAYTGCSSDGETKLADISVAENVAKEESFLWRANFEEFIRYLRDKALTENVRARMDDGAATVLSAILKATRNIDKNVKIEQSAPCTLDTISSEVMKTENGRTMTMDRVKAALVQLGCLNQNIVDFKRIIHLARNEEVESIVLKRYGRDAYRMFRHLLKENQFRPTDQIAEATLVEKKEAPKLLFKLWRENYLQMEKLTVSMTSQNGTSPILMWKVNQPLLWEHVLDEMYHGALNLKLRMAFEEEKDEEILNMSKKTRSASALLQKKYDRLRNVLVLLKSSLMKLDDALMLFHDF 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04236 506 FunFam DNA-directed RNA polymerase III subunit RPC3 2 82 - -
Mepo4g04236 506 Pfam RNA polymerase III subunit RPC82 149 316 IPR008806 GO:0003677|GO:0006351
Mepo4g04236 506 Gene3D - 2 77 IPR036388 -
Mepo4g04236 506 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 3 506 IPR039748 GO:0003697|GO:0005666
Mepo4g04236 506 Gene3D - 246 336 IPR036388 -
Mepo4g04236 506 Gene3D - 337 428 IPR036388 -
Mepo4g04236 506 Gene3D - 87 171 IPR036388 -
Mepo4g04236 506 FunFam DNA-directed RNA polymerase III subunit rpc3 87 169 - -
Mepo4g04236 506 Pfam RNA polymerase III subunit RPC82 helix-turn-helix domain 10 68 IPR013197 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04236 K03023 - gmx:100803947 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04236 4 52201554 52210301 Mepo4g04236 4 52201554 52210301 ECH