Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04179 ATGGCAAAGAATTCTCATACCTTGTCACTATTTCTTTTCCTCACTCTTGTTGGAACCTCCTATGCTGGTGGCATAGCCATCTACTGGGGCCAAAATGGTGAAGAGGGCTCACTGTATGAAACATGTGCCACTGGGAGATACACCCACATAAACATTGCCTTCCTCTCCAGATTCGGCAATGGTCGAACCCCTACGTTGAACTTAGCAGGTCACTGCAACCCTTCAACTAATTCATGCACCAAATTAAGTCACAGCATCAAGTATTGCCAGAGCAGAGGTATCACAATGTTTCTTTCTATCGGCGGTGGACTCGGAAGATACTCTTTGGCTTCAATTGAGGATGCTAGAAGCTTCTCAAGATATTTATGGAACACTTTCTTGGGTGGCACATCATCTTCAAGACCGTTTGGTGATGCTGTGTTAGATGGCATAGATTTTGACATTGAATTTGGCTCCAGAAAAAATTGGCAACACCTTGCACAATTTCTCAAGGATTATAATGGGGTTTATCTAAGTGCTGCTCCTCAATGTCCATTTCCTGATAGATTCTTAGGAAGAGCCCTTGAAACAGGACTTTTTGACTTTGTTTGGGTTCAGTTCTATAATAATCGCGCATGTGATTATAATAAGCATAGAAAGAATAACCTTGTGAGTTCATGGAAACAATGGACAACTACTATTCCAGCTTGGAAGATATTTTTGGGGTTGCCGGCGGCTAAGGACGCAGCTGGAAGCGGTTTTATTCCGGCCAATGTATTGACGTCTGAAATCCTACCTTTGATTCAGCATACATCAAAGTATGGAGGTGTTATGCTTTGGTCAAGATACTTTGATGAGTGGACTGGTTATAGCCGTTCCATTATCGCTAGTGTGTGA 876 0.4258 MAKNSHTLSLFLFLTLVGTSYAGGIAIYWGQNGEEGSLYETCATGRYTHINIAFLSRFGNGRTPTLNLAGHCNPSTNSCTKLSHSIKYCQSRGITMFLSIGGGLGRYSLASIEDARSFSRYLWNTFLGGTSSSRPFGDAVLDGIDFDIEFGSRKNWQHLAQFLKDYNGVYLSAAPQCPFPDRFLGRALETGLFDFVWVQFYNNRACDYNKHRKNNLVSSWKQWTTTIPAWKIFLGLPAAKDAAGSGFIPANVLTSEILPLIQHTSKYGGVMLWSRYFDEWTGYSRSIIASV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04179 291 CDD GH18_hevamine_XipI_class_III 23 289 IPR045321 -
Mepo4g04179 291 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 23 291 IPR001223 GO:0005975
Mepo4g04179 291 SUPERFAMILY (Trans)glycosidases 22 287 IPR017853 -
Mepo4g04179 291 FunFam Acidic endochitinase SE2 23 291 - -
Mepo4g04179 291 Pfam Glycosyl hydrolases family 18 25 255 IPR001223 GO:0005975
Mepo4g04179 291 Gene3D Glycosidases 23 288 - -
Mepo4g04179 291 PANTHER ENDOCHITINASE 8 287 - -
Mepo4g04179 291 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 141 149 IPR001579 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04179 Mepo-Chr4 51721044 51722092 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04179 1 291 Glycoside Hydrolase AT5G24090 57.525 1.24e-127 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04179 K01183 - gmx:100809864 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04179 4 51721044 51722092 Mepo4g04179 4 51721044 51722092 ECH