Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04045 ATGTCTCAGCTTCTTCAAACACCGTTTCTCTCTTCCTCCACCGTCCTTCGCCGCACACGCACCTCCCTCCACCGCACCTCCCCAACCACAAACCACTTTGTAGTTCGTGCCAAGATCCGTGAAATCTTCATGCCAGCACTCAGCTCCACAATGACCGAGGGTAAAATTGTTTCATGGATCAAATCCGAAGGCGATAAACTCTCCAAAGGCGACAGTGTCGTTGTTGTTGAATCCGATAAAGCTGACATGGATGTCGAAACTTTCTACGACGGTATCCTCGCCGCTATTGTTGTTGAAGAAGGTGATGTCGCCGCTGTTGGATCTCCCATCGCATTTCTCGCTGAAACTGAAGAAGAAATTGAATTAGCCAAGTCCAAGGCTCTTTCATCTTCATCTTCTTCATCCTCTACTTCTCCTTCTCCTGCACCCACACCCGCACCCGCACCCGCACCCGTAGAATCTCAACCGAAGAAGGTTGTTGCAGCGGCGGTTGTTTCCAAACATCCGGCGTCGGAGGGAGGGAAGAGAGTGGTGGCATCACCTTATGCGAAGAAATTGGCAAAGGAGTTGAAGGTGGAGTTGGGACAAATTATTGGGACCGGACCTTCAGGGAGGGTTGTGGCGAAAGATGTTGAGGCATTTGCAGCTACAGGGAGTGTTGCAGCCGTTGCGGAGCCGGTGAATACTGCGGTTTCTGGTATTGAATTGGGGACTGTTGTGCCGTTTACGACAATGCAGAATGCTGTGAGTAGGAATATGGTGGAGAGTTTGGGGGTTCCTACATTTAGAGTTGGTTATACTATTACTACTGATGCACTTGATGCCCTCTACAAGAAGATCAAGTCAAAGGGAGTTACTATGACAGCATTGCTTGCTAAGGCTACAGCACTCGCACTGGCTAAACACCCTGTTATAAACTCTAGTTGTAGGGATGGTAATAGCTTTACATACAACAGCAGCATCAACATTGCAGTCGCCGTGGCTATAGATGGTGGACTTATTACACCGGTGCTTCAGGATGCTGATAAGGTTGATGTCTATTCATTGTCTAGAAAGTGGAAGGAGTTGGTTGATAAGGCCAGAGCTAAGCAGCTGCAGCCTCATGAATACACCACAGGCACTTTCACTCTTTCCAACCTGGGAATGTTTGGCGTTGATCGCTTTGATGCTATTCTGCCTCCTGGAACCGGGGCAATTATGGCAGTTGGAACATCACAGCCAACTGTTGTGGCTACTAAGGATGGTCGCATTGGCATGAAGAATCAAATGCAGGTCAATGTTACAGCAGATCACCGTGTAATCTACGGTTCTGATCTAGCTCTGTTCTTGCAAACTCTGTCTCAGATTATCGAGGACCCTAAAGATCTTACTTTCTAG 1377 0.4815 MSQLLQTPFLSSSTVLRRTRTSLHRTSPTTNHFVVRAKIREIFMPALSSTMTEGKIVSWIKSEGDKLSKGDSVVVVESDKADMDVETFYDGILAAIVVEEGDVAAVGSPIAFLAETEEEIELAKSKALSSSSSSSSTSPSPAPTPAPAPAPVESQPKKVVAAAVVSKHPASEGGKRVVASPYAKKLAKELKVELGQIIGTGPSGRVVAKDVEAFAATGSVAAVAEPVNTAVSGIELGTVVPFTTMQNAVSRNMVESLGVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALAKHPVINSSCRDGNSFTYNSSINIAVAVAIDGGLITPVLQDADKVDVYSLSRKWKELVDKARAKQLQPHEYTTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGTSQPTVVATKDGRIGMKNQMQVNVTADHRVIYGSDLALFLQTLSQIIEDPKDLTF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04045 458 Gene3D - 166 219 IPR036625 GO:0016746
Mepo4g04045 458 Pfam Biotin-requiring enzyme 41 111 IPR000089 -
Mepo4g04045 458 Gene3D - 35 139 - -
Mepo4g04045 458 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 238 456 IPR001078 GO:0016746
Mepo4g04045 458 CDD lipoyl_domain 41 111 - -
Mepo4g04045 458 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 28 457 IPR045257 GO:0006086|GO:0045254
Mepo4g04045 458 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 64 93 IPR003016 -
Mepo4g04045 458 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 170 216 IPR036625 GO:0016746
Mepo4g04045 458 MobiDBLite consensus disorder prediction 125 139 - -
Mepo4g04045 458 Gene3D - 231 457 IPR023213 -
Mepo4g04045 458 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 35 138 - -
Mepo4g04045 458 Pfam e3 binding domain 177 212 IPR004167 GO:0016746
Mepo4g04045 458 SUPERFAMILY CoA-dependent acyltransferases 238 456 - -
Mepo4g04045 458 FunFam Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 234 457 - -
Mepo4g04045 458 SUPERFAMILY Single hybrid motif 38 128 IPR011053 -
Mepo4g04045 458 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 178 215 IPR004167 GO:0016746
Mepo4g04045 458 ProSiteProfiles Biotinyl/lipoyl domain profile. 39 114 IPR000089 -
Mepo4g04045 458 MobiDBLite consensus disorder prediction 124 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04045 Mepo-Chr4 50042376 50046421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04045 1 458 Acyl Lipid Metabolism Gene Families AT1G34430 76.923 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04045 K00627 - gmx:100799926 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04045 4 50042376 50046421 Mepo4g04045 4 50042376 50046421 ECH