Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04044 ATGAAGATGAGTGGTTCCACTTCCACTTTCACTCATTTCCCTTACTCTTCTCCTTCTCTTTCCTCTATCTTCCCTTCCAAATCCACCTTTCAATCTCTTCCCTCTAAACTCACCACTTCATCACCATGCTCATTCAAAAAGATTAAAGCCTTGGGAATTCAGCAAACAGGATCCACTTCACATGGAGACAACCTTGATTCAGTCAAGAGTAGGATTGTACTACAGATGTTTCAAAGGGCAATGCCAACAGAACCCCTTATAACCATTTTCACAAAACAATCCGAGTTGAATGACTTTTCAGTGGAAAATCTTCAAGATTGGAGAAAGTCATCCAAATGGGTTTCAGCATTCTTGTTTACCCAAACTATATCAGTTTTTTCTCCTGATGTTTCATATGCAAGTGACTCAGTGAAGATAAATGAGATGTATCAGGTCGGGGAGTTGTTTGACTTAGGAATCCAACTAATATACTTGCTACTGTTGTTGGGTTTGCTCGGAGCTGGGACTTACTACGTGATTCGCCAAGTTCTAGTCCGCAGAGAACTTGACCTTTCTGCCAAAGAGTTGCAAGAGCAAGTCAGAAGCGGCGATGCAAATGCGACTGAGCTGTTTGAACTTGGTGCAGTGATGCTGCGGAGGAAATTTTACCCAGCTGCCACCAAGTTTTTGCTTCAAGCAATTGATAAATGGGATGGAGAAAGTCAGGATCTTGCACAGGTTTACAACGCTCTTGGTGTCAGTTATGTTCGCGATGGGAAGCTTGAAAAAGGAATTGCTCAATTTGAGAAAGCTGTGAATATTCAACCTGGCTATGTCACAGCATGGAACAATCTTGGTGATGCATATGAAAGTAAAAAAGAATATCCGTCTGCACTGAAGGCATTTGAAGAAGTGCTTCTATTTGATCCTAACAACAAGATTGCACGGCCCAGGAGAGATTCTTTGAAGGAACTTGTTGGAATGACGCAAGGTGTTACTGTCAGATATAGAGAGAAGAAATGA 1002 0.4172 MKMSGSTSTFTHFPYSSPSLSSIFPSKSTFQSLPSKLTTSSPCSFKKIKALGIQQTGSTSHGDNLDSVKSRIVLQMFQRAMPTEPLITIFTKQSELNDFSVENLQDWRKSSKWVSAFLFTQTISVFSPDVSYASDSVKINEMYQVGELFDLGIQLIYLLLLLGLLGAGTYYVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGESQDLAQVYNALGVSYVRDGKLEKGIAQFEKAVNIQPGYVTAWNNLGDAYESKKEYPSALKAFEEVLLFDPNNKIARPRRDSLKELVGMTQGVTVRYREKK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04044 333 Gene3D Tetratricopeptide repeat domain 175 323 IPR011990 GO:0005515
Mepo4g04044 333 ProSiteProfiles TPR repeat region circular profile. 238 269 - -
Mepo4g04044 333 ProSiteProfiles TPR repeat region circular profile. 272 305 - -
Mepo4g04044 333 SUPERFAMILY TPR-like 196 310 IPR011990 GO:0005515
Mepo4g04044 333 SMART tpr_5 272 305 IPR019734 GO:0005515
Mepo4g04044 333 SMART tpr_5 238 271 IPR019734 GO:0005515
Mepo4g04044 333 Pfam Tetratricopeptide repeat 274 305 IPR001440 GO:0005515
Mepo4g04044 333 ProSiteProfiles TPR repeat profile. 238 271 IPR019734 GO:0005515
Mepo4g04044 333 ProSiteProfiles TPR repeat profile. 272 305 IPR019734 GO:0005515
Mepo4g04044 333 Pfam Tetratricopeptide repeat 238 269 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04044 183 303 Glycosyltransferase AT3G11540 28.226 3.59e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04044 - - psat:127098590 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04044 4 50037584 50041282 Mepo4g04044 4 50037584 50041282 ECH