Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03871 ATGGCACTCTCGCGCCTTCGTCACCCTCTCATCTCTCATTCCATTCGTATCCTCTCTTCTTCCACCAGATCCATTTCGAGAACTCCTAATTCAAGGATTTATTCCATCGTTGATAATGGGAATCTAAGGCCTGCATCTTGGTCTGGGCTTACTGGAGTTTGTAATAGGCCTTTAAAGTCAAGGTGGATTGATGTCAAATTCTTCTCGTCTTCAGATTTTCCACATGAAGTCCTTGGGATGCCAGCTTTATCTCCTACAATGACCCAAGGTAATATTGCAAAATGGAGGAAAAAAGAAGGGGATAAGATAGCAGTGGGTGATATACTATGTGAAATTGAAACTGACAAAGCTACACTTGAATTTGAAAGTCTTGAAGAAGGATTTCTGGCTAAGATATTGGTACCTGATGGTTCAAAGGATGTGCCAGTTGGACAACCGATTGCAATAACAGTTGAGGAAGAAAGCGACATTCAAAATGTTCCTGCTTCTGTGGGGGGTGAGAGTGGGGTTGAAGAGAATAAACCAGCACACCAGGATGCCGCAGATGAGGAAAGAAAACCAGAAACAACTTCTACGACCGACACATCAAATCTTCCACCTCACATTGTTCTTGGAATGCCTGCTTTGTCCCCAACAATGAACCAAGGAAACATTGCTAAATGGAATAAAAAAGAAGGAGACAAGATTGAAGTGGGTGACATATTATGCGAGATAGAGACAGACAAAGCTACCCTTGAATTTGAAAGTCTTGAAGAGGGGTTTCTGGCTAAGATAGTTGCACCAGAAGGTTCAAAAGAAGTGGCAGTTGGACAGCCTATTGCAATAACAGTTGAAGATGCAAGTGATATTGAAGCTGTTAAGAATTCTCCTAGCAGCAGCTCAGTGAACCAGAAGGAGAAGACCACCCAACATGACACTAAAAGTGAGGTCAAAACAAAGAAAACAAATACAGCACGAATCAGTCCAGCTGCAAAGTTGCTAATTATGGAATATGGATTGGACGCATCAACATTGAATGCAACTGGTCCTCACGGCACCCTACTGAAAGGTGATGTTCTTTCTGCAATTAAATCAGGAAAATTGTCTTCAAAACCTGCTTCATCTAAAGAAAAGGCATCATCATCTCAAAGTCATCAAGTTGCGGCTTCACAAGAATCAAAATCTGGCTTAAAGCAGTCAGATACTCATGAAGATTTTCCGAATAGTCAAATTCGCAAGGTGATTGCCAAGAGGTTATTGGAATCTAAACAAAACACGCCACACTTATATTTATCAGCAGATGTTACACTGGATCCTCTTCTTTCCCTTAGAAAGGATCTTAAAGAGCAGTATGACGTCAAAGTTTCAGTGAATGACATTATTATCAAAGTTGTAGCAGCTGCTCTCAGAAATGTTCCAGAAGCGAATGCATACTGGAATGATGAGAAAGGGGAAGTCATCTTATGCGACTCCGTTGACATATCAATTGCAGTTGCCACCGAGAAGGGCTTGATGACTCCAATATTAAAAAATGCGGATCACAAGACAATATCTGCCATCTCCTCAGAGGTCAAGGAGCTAGCTGCAAAAGCTCGTGAAGGGAAGTTGAAGCCGCAAGAATTTCAAGGGGGGACTTTTAGCATTTCAAACTTAGGAATGTATCCTGTGGATAAATTCTGTGCTATTATAAATCCCCCACAGGCTTGCATTCTTGCTGTAGGGAGAGGGAACAAAGTAGTTGAAGCAGTAATTGGAGCTGATGGAATTGAGAAGCCATCTGTTGCCACTAAGTTGAACTTAACATTGTCTGCCGATCATCGCGTCTTTGATGGCAAAGTTGGAGGTGCATTTCTCTCTGCTCTTCAGTCAAACTTCAGAGATATAAGACGACTTCTTTTATAA 1881 0.4163 MALSRLRHPLISHSIRILSSSTRSISRTPNSRIYSIVDNGNLRPASWSGLTGVCNRPLKSRWIDVKFFSSSDFPHEVLGMPALSPTMTQGNIAKWRKKEGDKIAVGDILCEIETDKATLEFESLEEGFLAKILVPDGSKDVPVGQPIAITVEEESDIQNVPASVGGESGVEENKPAHQDAADEERKPETTSTTDTSNLPPHIVLGMPALSPTMNQGNIAKWNKKEGDKIEVGDILCEIETDKATLEFESLEEGFLAKIVAPEGSKEVAVGQPIAITVEDASDIEAVKNSPSSSSVNQKEKTTQHDTKSEVKTKKTNTARISPAAKLLIMEYGLDASTLNATGPHGTLLKGDVLSAIKSGKLSSKPASSKEKASSSQSHQVAASQESKSGLKQSDTHEDFPNSQIRKVIAKRLLESKQNTPHLYLSADVTLDPLLSLRKDLKEQYDVKVSVNDIIIKVVAAALRNVPEANAYWNDEKGEVILCDSVDISIAVATEKGLMTPILKNADHKTISAISSEVKELAAKAREGKLKPQEFQGGTFSISNLGMYPVDKFCAIINPPQACILAVGRGNKVVEAVIGADGIEKPSVATKLNLTLSADHRVFDGKVGGAFLSALQSNFRDIRRLLL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03871 626 ProSiteProfiles Biotinyl/lipoyl domain profile. 75 151 IPR000089 -
Mepo4g03871 626 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 100 129 IPR003016 -
Mepo4g03871 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 71 175 - -
Mepo4g03871 626 Pfam Biotin-requiring enzyme 204 275 IPR000089 -
Mepo4g03871 626 Pfam Biotin-requiring enzyme 78 149 IPR000089 -
Mepo4g03871 626 MobiDBLite consensus disorder prediction 285 316 - -
Mepo4g03871 626 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 395 625 IPR001078 GO:0016746
Mepo4g03871 626 MobiDBLite consensus disorder prediction 172 190 - -
Mepo4g03871 626 Gene3D - 310 372 IPR036625 GO:0016746
Mepo4g03871 626 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 319 356 IPR004167 GO:0016746
Mepo4g03871 626 MobiDBLite consensus disorder prediction 362 389 - -
Mepo4g03871 626 MobiDBLite consensus disorder prediction 158 200 - -
Mepo4g03871 626 SUPERFAMILY Single hybrid motif 78 164 IPR011053 -
Mepo4g03871 626 MobiDBLite consensus disorder prediction 362 398 - -
Mepo4g03871 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 381 624 - -
Mepo4g03871 626 Gene3D - 70 174 - -
Mepo4g03871 626 Gene3D - 198 302 - -
Mepo4g03871 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 197 302 - -
Mepo4g03871 626 Gene3D - 380 626 IPR023213 -
Mepo4g03871 626 MobiDBLite consensus disorder prediction 300 314 - -
Mepo4g03871 626 CDD lipoyl_domain 206 275 - -
Mepo4g03871 626 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 204 626 IPR045257 GO:0006086|GO:0045254
Mepo4g03871 626 MobiDBLite consensus disorder prediction 285 299 - -
Mepo4g03871 626 Pfam e3 binding domain 319 353 IPR004167 GO:0016746
Mepo4g03871 626 SUPERFAMILY CoA-dependent acyltransferases 392 626 - -
Mepo4g03871 626 NCBIfam pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 204 617 IPR006257 GO:0004742|GO:0006090|GO:0045254
Mepo4g03871 626 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 IPR003016 -
Mepo4g03871 626 SUPERFAMILY Single hybrid motif 201 292 IPR011053 -
Mepo4g03871 626 CDD lipoyl_domain 80 149 - -
Mepo4g03871 626 ProSiteProfiles Biotinyl/lipoyl domain profile. 201 277 IPR000089 -
Mepo4g03871 626 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 313 358 IPR036625 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03871 Mepo-Chr4 48020735 48032049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03871 193 626 Acyl Lipid Metabolism Gene Families AT3G13930 42.795 2.18e-110 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03871 K00627 - gmx:100800280 960.674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03871 4 48020735 48032049 Mepo4g03871 4 48020735 48032049 ECH