Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03709 ATGGAGAAGGTGATGAGGTTGGCTACAGAAAAGGGTGTTGTGATTTTCACCAAGAGCTCTTGTTGTTTGTGCTATGCAGTGAACATTCTGTTTCAAGAAATTGGAGTGTTCCCTGTGGTTCATGAAATTGACAAAGATCCTGAAGGGAAAGAAATGGAAAAAGCTATAACAAAGTTGGGTTGTAATGCACCTGTCCCTGCAGTATTCATCGGAGGAAGGCTTGTGGGGTCCACCAATGAAGTAATGTCCCTACACCTAAGTGGTTCACTCGTTCCACTACTTAGGCCATACCGAATTTAG 300 0.4333 MEKVMRLATEKGVVIFTKSSCCLCYAVNILFQEIGVFPVVHEIDKDPEGKEMEKAITKLGCNAPVPAVFIGGRLVGSTNEVMSLHLSGSLVPLLRPYRI 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03709 99 PANTHER GLUTAREDOXIN 1 95 IPR011905 -
Mepo4g03709 99 ProSiteProfiles Glutaredoxin domain profile. 1 99 - -
Mepo4g03709 99 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Mepo4g03709 99 NCBIfam glutaredoxin-like family 4 96 IPR011905 -
Mepo4g03709 99 Gene3D Glutaredoxin 1 98 - -
Mepo4g03709 99 CDD GRX_GRXh_1_2_like 13 93 - -
Mepo4g03709 99 Pfam Glutaredoxin 13 75 IPR002109 -
Mepo4g03709 99 FunFam Glutaredoxin family protein 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03709 Mepo-Chr4 46511993 46512292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03709 1 95 Miscellaneous Gene Families AT4G15670 50.526 5.71e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03709 K03676 - gmx:100500442 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03709 4 46511993 46512292 Mepo4g03709 4 46511993 46512292 ECH
Mepo3g03676 3 46451412 46452175 Mepo4g03709 4 46511993 46512292 PCT
Mepo4g03709 4 46511993 46512292 Mepo3g03677 3 46455750 46456061 PCT