Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03626 ATGGATTCAATCCTCATCACCATTGTATTTCTCCTTCTCTTATTGAGTGGTGAGGCACGTGATCCTTTTGCATGTGACCCAAAAAACACCTCAACAAATAACTTACCATTTTGCAAGGCATCACTGCCTATACCAACAAGGGTGAATGACCTCATTGGAAGGTTGACATTACAAGAAAAGGTTAGCATGTTAGTGAACAATGCTGCAGCGGTTCCAAGGGTTGGGATCAAAGGCTATGAGTGGTGGTCAGAAGCACTTCATGGAGTTTCAAATGTGGGACCAGGAACTAAGTTTGGTGGCCAATTCCCAGCTGCCACTAGCTTCCCTCAAGTCATCACTACCGTTGCTTCATTCAATGCTTCCTTGTGGGAAGCAATTGGACGGGTTGCTTCCGACGAAGCAAGGGCAATGTATAACGGAGGAATGGCTGGGTTGACATACTGGAGTCCAAATGTGAACATTTTTAGGGACCCACGATGGGGTCGTGGACAGGAGACTCCCGGTGAGGACCCGATTCTAGCAGGTAAATACGCTGCTAGTTATGTGAGAGGACTGCAGGGAACAGACCGTAGCCGGTTAAAGGTGGCTGCTTCATGTAAACACTTTACGGCTTATGATATTGATAATTGGAATGGTGTGGATCGCTTTCACTTTAATGCAAAGGTTAGCAAACAGGACATGGAAGACACGTTCAATGTGCCATTTAGGATGTGTGTCAAGGAAGGTAATGTGGCTAGTGTGATGTGTTCTTACAATCAGGTTAATGGTGTCCCTACTTGTGCTGACCCCAATCTTCTAAAGAGGACAGTTCGTGGTCAATGGCATCTTAATGGGTACATTGTATCAGATTGTGATTCTGTTGGGGTATTTTATACTAACCAACATTATACATCAACACCTGAAGAAGCTGCTGCTGATGCCATTAAAGCAGGTTTGGATTTGGATTGTGGACCTTTCCTTGCACAACATACCCAAAATGCCGTTAAAAAAGGCTTGTTAACCGAAACTGATGTAAACGGTGCTTTAGCAAACACACTTACAGTCCAAATGAGGTTAGGAATGTTTGAGGGTGAGCCATCTGCTCAACCATATGGCAACCTTGGTCCAACCGATGTGTGCAGTCCAACTCACCAAGAGTTAGCTCTTGAAGCTGCAAGACAAGGGATTGCGCTTCTTAAGAACACTGGTTCATCTTTGCCTCTCTCCACAAAAAATCATCGTACTGTGGCAGTCATTGGGCCAAATTCTAATGCTACTGTCACTATGATCGGCAACTATGCTGGTATTGCTTGTGGATACACAAGTCCGCTACAAGGAATAGGGAAATATGCAAGGACTATTCATGAGCCCGGTTGTGCGAATGTGGCATGCAACGATGATAATCAATTTGGGTCGGCTCTAAATGCAGCCCGTCAAGCGGATGCTACTGTTTTAGTGATGGGATTGGATCAGTCAATTGAGGCTGAAATGGTCGATAGGACTGGTTTACTTCTTCCTGGACATCAACAAGACCTTGTTTCAAAGGTAGCTGCTGCCTCGAGAGGTCCAACCATTTTGGTCTTAATGTCTGGTGGACCTATAGATATAACTTTTGCAAAGAATGATCCTCGAATTGTAGGCATTTTGTGGGCTGGTTATCCTGGTCAAGCCGGTGGCGCTGCCATTGCGGATATATTGTTTGGAATCGCTAACCCAGGAGCTAAGTTACCTATGACATGGTACCCACAAGGATACCTAAAAAACTTGGCAATGACAGATATGGCAATGAGACCAAGCTCATCCACAGGGTACCCTGGGAGAACCTATCGTTTTTACAACGGCCCTGTGGTATATCCATTTGGTTATGGATTATCTTACACCAATTTTATTCACACATTAGCTAGTGCACCAAAAGTGGTGTCAATTCCAGTAGACGGCCACCGGCGTGGAAATAGCTCAAACAAAGCAGCAATTAGAGTGACACATGCACGATGTGGCAAGCTTTCCATTAGACTTGACATTGATGTTAAAAACGTTGGTTCAAAAGATGGTACTAACACTTTGTTGGTGTTCTCAGTACCACCAGCAGGTAATGGTCATTGGGCACCACAGAAGCAACTAGTGGCTTTTGAGAAAGTCCATGTTCCTGCTAAGGCTCAGCAACGAGTGAGTATCGATATTCATGTATGTAAGCTTTTGAGTGTGGTTGATAAGTCTGGGACTAGGAGAATTCCAATGGGAGTACATAGTATTCATATTGGTGATGTGAAACACTTTGTATCACTTCAAGAACAAACACTAGGGATCATCAAGACCTGA 2298 0.4439 MDSILITIVFLLLLLSGEARDPFACDPKNTSTNNLPFCKASLPIPTRVNDLIGRLTLQEKVSMLVNNAAAVPRVGIKGYEWWSEALHGVSNVGPGTKFGGQFPAATSFPQVITTVASFNASLWEAIGRVASDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPILAGKYAASYVRGLQGTDRSRLKVAASCKHFTAYDIDNWNGVDRFHFNAKVSKQDMEDTFNVPFRMCVKEGNVASVMCSYNQVNGVPTCADPNLLKRTVRGQWHLNGYIVSDCDSVGVFYTNQHYTSTPEEAAADAIKAGLDLDCGPFLAQHTQNAVKKGLLTETDVNGALANTLTVQMRLGMFEGEPSAQPYGNLGPTDVCSPTHQELALEAARQGIALLKNTGSSLPLSTKNHRTVAVIGPNSNATVTMIGNYAGIACGYTSPLQGIGKYARTIHEPGCANVACNDDNQFGSALNAARQADATVLVMGLDQSIEAEMVDRTGLLLPGHQQDLVSKVAAASRGPTILVLMSGGPIDITFAKNDPRIVGILWAGYPGQAGGAAIADILFGIANPGAKLPMTWYPQGYLKNLAMTDMAMRPSSSTGYPGRTYRFYNGPVVYPFGYGLSYTNFIHTLASAPKVVSIPVDGHRRGNSSNKAAIRVTHARCGKLSIRLDIDVKNVGSKDGTNTLLVFSVPPAGNGHWAPQKQLVAFEKVHVPAKAQQRVSIDIHVCKLLSVVDKSGTRRIPMGVHSIHIGDVKHFVSLQEQTLGIIKT 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03626 765 SUPERFAMILY (Trans)glycosidases 35 388 IPR017853 -
Mepo4g03626 765 Gene3D Immunoglobulins 645 762 IPR013783 -
Mepo4g03626 765 PANTHER SUGAR HYDROLASE-RELATED 14 751 IPR044993 GO:0009044|GO:0045493
Mepo4g03626 765 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 389 622 IPR036881 GO:0004553|GO:0005975
Mepo4g03626 765 Gene3D - 375 620 IPR036881 GO:0004553|GO:0005975
Mepo4g03626 765 Pfam Fibronectin type III-like domain 687 748 IPR026891 -
Mepo4g03626 765 FunFam probable beta-D-xylosidase 2 374 620 - -
Mepo4g03626 765 Pfam Glycosyl hydrolase family 3 C-terminal domain 389 619 IPR002772 GO:0004553|GO:0005975
Mepo4g03626 765 Gene3D - 47 363 IPR036962 GO:0004553|GO:0005975
Mepo4g03626 765 FunFam probable beta-D-xylosidase 7 47 361 - -
Mepo4g03626 765 SMART Fn3_like_2 679 750 IPR026891 -
Mepo4g03626 765 Pfam Glycosyl hydrolase family 3 N terminal domain 101 345 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03626 Mepo-Chr4 45616217 45620248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03626 3 765 Glycoside Hydrolase AT1G02640 74.151 0.0 1189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03626 - - gmx:100798630 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03626 4 45616217 45620248 Mepo4g03626 4 45616217 45620248 ECH
Mepo3g03771 3 47195230 47201298 Mepo4g03626 4 45616217 45620248 PCT