Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03127 ATGTTCAACTTCAAAAGATTATGCCTTCTAATATTTTTCCTCTTGCTATCCTTTGATGTTTCTTTGTGTTTATCTTCTTCACTTGGGAAGTTCAAGTTTTGTTTGGATAATAACAAAATAAAAAACTTTACTGTTTTCCCTTACAAAGAACATGATCAATCCTTTGCTAATGACTACTACAAAATTCTCAATTTTTCAGTTCAAAACCTTCGGTTCACGGAACCAAATATTCCTAAGCCAATAGCAATTGTCCTTCCAGAGACTTTGGTGCAGCTACAGAACAGTGTAGCATGCTGTAGAGAATTCTCTTTGGAAATAAGAGTGAGAAGTGGTGGACATAGCTATGAAGGAACTTCCTCTGTTGCTGATGATGGAACTCTTTTTGTCATCATTGACATGATGAATTTGAACCATGTCTGGGTGCATATGGAGACAAAAACAGCATGGGTTGAAGGCGGTGCAACATTGGGAGAAACTTACTATGCTATCTCTCAGGCTAGTGATGAATATGGATTCTCAGCTGGGTCATGTCCAACTGTAGGAGTTGGCGGACATATCGGTGGTGGTGGATTTGGTTTATTGTCTAGAAAATACGGACTTGCAGCAGATAATGTGGTTGATGCCCTTCTTGTTGATGCTGATGGACGAGTATTAGAACGTGCAACCATGGGAGAAGATGTGTTTTGGGCTATTAGAGGAGGAGGTGGTGGTCTCTGGGGAATTGTATATGCCTGGAAAATTCAATTGTTGAAAGTACCACAAGTTGTAACCAGTTTCATTGCATCCAGAACAGGCACAAAAAATCATATTGCAAAGCTAGTGAACAAATGGCAACATGTGGCACCAAATTTGGAAGATGAGTTCTACTTGTCATGCTTTGTTGGTGCTGGTTTGCCTGAAGCTAAAATAATAGGCTTATCAACAACATTTAAAGGGTTTTATCTTGGTCCCAAGTCGAAGGCCATATCTATATTGAATCAGGATTTTCCTGAATTGGATGTTGCAGATGAAGAATGTAGAGAAATGAGTTGGATTGAGTCAGTTGTTTTCTTCTCTGGACTAAAAGATGGAGCTTCTGTTTCTGACTTGAGGAATAGGTATATGCAAGATAAAGAATATTTCAAGGCAAAATCAGATTTTGTAAGGAGCTATGTTCCTCTTGTAGGTATAGAAACTGCATTGGATATTCTAGAAAAGGAGCCTAAAGGGTTTGTTATTTTGGACCCTTATGGTGGGATGATGCATAATATAAGCAGTGAATCTATTGCTTTTCCCCACAGAAAAGGAAATATTTTTACAATTCAGTACCTGATCTATTGGAAAGAAGCAGACAATGACAAAAGTAGTGATTATATTGATTGGATAAGAGGATTCTATTCTTCTATGACTCCTTTTGTTTCATATGGTCCAAGGGCTGCATACATTAATTACATGGATTTTGACCTTGGAGTAATGGAGCTAATTAGTTTTGATGATGATTTGGTAAAAGCAAGAGTTTGGGGTGAAAAGTACTTCTTGAGTAACTATGATAGACTAGTTAGGGCCAAGACTTTGATTGATCCTGACAATGTTTTCACCAATCAACAAGGCATTCTTCCTATGTCATTTGCTAGTTCCAAAGCCCAAGTACTAAGTTCATAA 1641 0.3784 MFNFKRLCLLIFFLLLSFDVSLCLSSSLGKFKFCLDNNKIKNFTVFPYKEHDQSFANDYYKILNFSVQNLRFTEPNIPKPIAIVLPETLVQLQNSVACCREFSLEIRVRSGGHSYEGTSSVADDGTLFVIIDMMNLNHVWVHMETKTAWVEGGATLGETYYAISQASDEYGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLVDADGRVLERATMGEDVFWAIRGGGGGLWGIVYAWKIQLLKVPQVVTSFIASRTGTKNHIAKLVNKWQHVAPNLEDEFYLSCFVGAGLPEAKIIGLSTTFKGFYLGPKSKAISILNQDFPELDVADEECREMSWIESVVFFSGLKDGASVSDLRNRYMQDKEYFKAKSDFVRSYVPLVGIETALDILEKEPKGFVILDPYGGMMHNISSESIAFPHRKGNIFTIQYLIYWKEADNDKSSDYIDWIRGFYSSMTPFVSYGPRAAYINYMDFDLGVMELISFDDDLVKARVWGEKYFLSNYDRLVRAKTLIDPDNVFTNQQGILPMSFASSKAQVLSS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03127 546 SUPERFAMILY FAD-binding/transporter-associated domain-like 72 253 IPR036318 GO:0050660
Mepo4g03127 546 Gene3D - 255 469 - -
Mepo4g03127 546 Pfam FAD binding domain 80 219 IPR006094 GO:0050660
Mepo4g03127 546 Gene3D - 141 533 IPR016169 -
Mepo4g03127 546 ProSiteProfiles PCMH-type FAD-binding domain profile. 76 252 IPR016166 GO:0071949
Mepo4g03127 546 Pfam Berberine and berberine like 473 531 IPR012951 GO:0016491|GO:0050660
Mepo4g03127 546 Gene3D - 30 136 IPR016167 -
Mepo4g03127 546 PANTHER OS08G0158400 PROTEIN 26 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03127 Mepo-Chr4 40648740 40650518 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03127 31 531 Miscellaneous Gene Families AT1G30760 41.071 1.26e-126 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03127 - - gmx:100790761 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03127 4 40648740 40650518 Mepo4g03127 4 40648740 40650518 ECH