Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02926 ATGGCGAATAACCGCAACACCACAATTCTTAAGGAAGTTAGAATCGTCATTGTTGGTGACAAATCCGCCGGCAAAACCACCCTCATTTCCGCCATGGCTTCTGATTCTTTCCCTGCCTCCGTTCCTCCATTGCTTCGTCCCACTCGCTTGCCTTCCAATTCATTCACTGATTCTGTTCCTCTCATCCTCATTGACACTCCTTCAAGTGTGGGAGAACAAGGCAAGGTTGTTGAAGAATTGAAGCGTGCTGATTCGGTGATTGTAACTTATGCTTGTGATGATACAATGAGTTTTGAGCGTGTGAGTACTCACTGGCTGCCTCAATTGCAGAAGCTTGAGGTGAAGGCACCTGTGCTTGTGGTTGGTTGTAAGCTCGATCTTCGCGATGAAAGTAGGCAAGTTAGCTTAGAGAGTCTTACCACAGGTATCATGAACCAGTTCAGAGAAGTTGTTACTTGTATTGAGTGCTCTGCAGCTACACTTTATCAGGTTCCCGAAGTTTTTTATTTTGCACAAAAAGCGGCACTTCATCCGGTGGATCCTTTGTTCGATTATGATACAAATGCTTTAACAGATCGGTGTGTAAGGGCACTGAGAAGAATATTTAATCTTTTTGATTACAACATGGATGGCACCCTCACTGATCATGAAGTAAACGAGTTTCAGATTAAAAGCTTCGGTGCATCATTGCAGCAGCCTGACATAACTCAATTAAAAACAATGATACTGAGGAATGTTCCTGAAGGAGTCAATTCTCTTGGTCTTACTTTTCCTGGCTTCATTGAAATCCATAATATGTTTCTAAAGAAAGGGCGAACAGAGACATTCTGGGCAGTTCTAAGAAAGTTTGGATATGGTAATGATTTAAAACTGCGTGATGATTTTCTTCCAGTTCCATCAAAGAAGGCTTCTGATCAGAGTGTGGAGCTGAGTGGTGCAGCCATAGAGTTTCTGAAGGGTGTCTTTAGATTGGTAGATACGGATAAGGATCAATTACTACGATCTGCAGAAGTTGATAAGCTATTTGATGCTGCTCCAGAAAGTCCGTGGAAGGATGCGCCATATATCGACGCAGCTGAGACAACTGACTTGGGTTATATATCTCTGAAGGGATTTCTTTCTCAGTGGGCTCTTATGACATTACTGGATCCAAGGTATAGCTTGGCCAATTTGATTTGTATCGGATATAGAGATAATCCTTCTGCAGCACTCCGCCTTACCAGTAGAAGATCAGAAGATCGCAAGAACCAAAAAACAGAAAGAAATGTGTTCCAATGCTATGTTTTTGGTTCTAAAACTGCCGGGAAATCTGCTTTGTTGCGTTCATTATTGGGAAGGCCTTTCTCAAATGACTATACCCCGACAACTGTTGAGAGGTATGCAGCAAACATCATTGAATTAATAGCGGGAACTAAGAAAACTCTCATACTGCGCGAAATTCCGGAGGATGAAGTATCAAATTTTTTGTCAAATAAGTATTGTTTGGCTGCATGTGATGTAGCTGCTTTTGTACATGACAGCTCAGATGGATATTCATGGAAAAGATCCATAGATTTGCTTGAGAAGGTTGTTAACCAAGGAGAGCTAACTGGTCACAGATTTCCTTGCCTCCTCATTGCTGCCAAGGATGATTTAACTCCATTCCCAAGGGCAGTACTAGATTCAGTTAAGGTTGCTCAGGAATTGAAAATAGACGCTCCTATTCGCTTGAGTATAAAATCAGATGATTCAAATAACGTGTATAGTAAGATTATCAATGCTGCAGAACACCCTCATTTAAGTATTCCAGAAACTGAGTTTGTGAGGAAAAGAAAGCAACACCAGCAGCTTCTTCACACTTTTATCTTTGCCTTAGCTGGGGCTGCTATGGCGCTTGCGGGTTTTACAGCTCGTCGTGCACGTGCGAATAGGAATTCTTCTTAG 1923 0.4202 MANNRNTTILKEVRIVIVGDKSAGKTTLISAMASDSFPASVPPLLRPTRLPSNSFTDSVPLILIDTPSSVGEQGKVVEELKRADSVIVTYACDDTMSFERVSTHWLPQLQKLEVKAPVLVVGCKLDLRDESRQVSLESLTTGIMNQFREVVTCIECSAATLYQVPEVFYFAQKAALHPVDPLFDYDTNALTDRCVRALRRIFNLFDYNMDGTLTDHEVNEFQIKSFGASLQQPDITQLKTMILRNVPEGVNSLGLTFPGFIEIHNMFLKKGRTETFWAVLRKFGYGNDLKLRDDFLPVPSKKASDQSVELSGAAIEFLKGVFRLVDTDKDQLLRSAEVDKLFDAAPESPWKDAPYIDAAETTDLGYISLKGFLSQWALMTLLDPRYSLANLICIGYRDNPSAALRLTSRRSEDRKNQKTERNVFQCYVFGSKTAGKSALLRSLLGRPFSNDYTPTTVERYAANIIELIAGTKKTLILREIPEDEVSNFLSNKYCLAACDVAAFVHDSSDGYSWKRSIDLLEKVVNQGELTGHRFPCLLIAAKDDLTPFPRAVLDSVKVAQELKIDAPIRLSIKSDDSNNVYSKIINAAEHPHLSIPETEFVRKRKQHQQLLHTFIFALAGAAMALAGFTARRARANRNSS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02926 640 Gene3D - 487 588 IPR027417 -
Mepo4g02926 640 SMART rho_sub_3 15 178 IPR001806 GO:0003924|GO:0005525
Mepo4g02926 640 PIRSF Miro 9 640 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0005741|GO:0007005
Mepo4g02926 640 CDD Miro2 420 600 - -
Mepo4g02926 640 PRINTS Transforming protein P21 ras signature 114 127 - -
Mepo4g02926 640 PRINTS Transforming protein P21 ras signature 13 34 - -
Mepo4g02926 640 PRINTS Transforming protein P21 ras signature 153 175 - -
Mepo4g02926 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 208 IPR027417 -
Mepo4g02926 640 ProSiteProfiles Miro domain profile. 421 590 IPR020860 GO:0003924|GO:0005525
Mepo4g02926 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 594 IPR027417 -
Mepo4g02926 640 Pfam EF hand associated 229 313 IPR013567 -
Mepo4g02926 640 SMART rab_sub_5 13 178 - -
Mepo4g02926 640 ProSitePatterns EF-hand calcium-binding domain. 206 218 IPR018247 -
Mepo4g02926 640 FunFam Mitochondrial Rho GTPase 185 289 - -
Mepo4g02926 640 Gene3D - 291 481 - -
Mepo4g02926 640 FunFam Mitochondrial Rho GTPase 488 589 - -
Mepo4g02926 640 Pfam EF hand associated 350 417 IPR013566 -
Mepo4g02926 640 Gene3D - 185 289 - -
Mepo4g02926 640 ProSiteProfiles Miro domain profile. 10 177 IPR020860 GO:0003924|GO:0005525
Mepo4g02926 640 Gene3D - 9 180 IPR027417 -
Mepo4g02926 640 Pfam Ras family 14 174 IPR001806 GO:0003924|GO:0005525
Mepo4g02926 640 SUPERFAMILY EF-hand 191 383 IPR011992 -
Mepo4g02926 640 PANTHER RHO FAMILY GTPASE 13 177 IPR003578 GO:0005525|GO:0007264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02926 Mepo-Chr4 38301275 38308337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02926 13 640 EF-hand Containing Proteins AT3G63150 52.146 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02926 K07870 - gmx:100806983 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03024 3 40319690 40330448 Mepo4g02926 4 38301275 38308337 PCT