Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02858 ATGAAGCTTTTTCGTCAACGCCAAAGGATCCTCATTCTTTCTCTTCTCTTTCTTTCCCTCGTTGCTCCTCTCATTTTCCTAGGGAGAAGAGAGTTCCTTGAAGATTTGTATCGTGTTACATACAGGACGGATAGTTTGAAGTTAAATGCTGTAGGACAGATTCAGCAAGATGCTGAAGAATTAGAAGAGCCTAATCAAGTTGTTTATAAAGAAAAAGACATTTCAACAATTAGTTACAGTTCAGAAAAGAATAATGATGCTGAGGAACCTAGATTTTCAGCTGTTGAAAGAAATGGATTCAACCATGATGAAAGACAAGACGAGGATGCTCAGGGAAAAGATTTATCCTCCACAGATGAAGATACAAATGTAAATGATGTTGCGCATGGAACATCGAAGGAGAATATTAAAGTGACCAATAGGCCATCGGGTCGAATAGCAGACCTTCATCATATTTTAAACTCTAATTCTCGTCAAGTGAAAAATCAGAAGGTTCAAGAGATTAAGGATAAAATTTTAATGGCTAAAGCATACTTGAAGCTTGCACCACCAAGCAGCAACTCACACTTGAAGGAGTTGGAGCTGCAAATGAAAGAGATGGAACGAGCAGTAGAAGGAGCCACCCGGGATTCAGATTTGTCAAGGAGTGTTTTGCAGGCAATGAGACACATGGATGCCTCACTGTCTACTGTCAGCCGTTCTGTCTCAGACTGTTCTATGGCTTCTAAGCTTCAAGCAATGAAGCGCAAAACTGAAGACCAAGTTCGTTTTCAGAGACGTCAAGCAACATATCTTGTTAATCTTGCTGTAAGGACTGCCCAAAAGAACTTTCACTGTCTTTCTATGCGGCTGACTGCTGAATATTTTGCCCTAAGACCTGAGGAGAGAAAGCTTCCAAATGAAAATAAGATTCATCATCCAGAACTTTATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGCTGTTGTTGTTAACTCTACTGTCTCAACTGCCAAGGAACCAGGGAAACTTGTTTTCCATATAGTGACTGATTCTCTCAACTTGCCAGCGATCTCGATGTGGTTCTTGATAAACTCTCCTGGCAATGCCACAGTTCATATACAGAGCATAGACAACATTGAATGGTTGTCGAAATACAATCCCTTCGGTAAAAACGGTAACAGCGATCCAAGATACACTTCTGAATTGATCTACTTGCTTTTCTACCTGCCTGACATTTTCCCTGCCCTAAATAAAATCGTGATCTTTGATCATGATGTGGTGGTTCAACAAGATCTCAGTGGACTATGGAATGTCAATATGAATGGAAATGTTAATGGAGCTGTTGGAACTTGTCAGGAAGGCAAAACCCCATTTCATAGGATTGATGCATTCATAAACTTCTCAGATCCACTAATTGGAGAGAGTTTTGATGTCAATTCTTGCACATGGGCATTTGGAATGAATTTGTTTGATTTGCAACAATGGAGAAGACAAAATTTAACGGCTGTCTATAACAAATATTCACAAATGGGTTCTGAGAAGCCATTGTGGAATTGGAACGTTGCACGGCTGCCTTTAGGTTGGATCACCTTCTACAACAAGACAGAGGTGTTGGACAGACGATGGCACATTCTTGGCCTTGGTCATAACTCAGGAGTCGATCGAAATGAGATTGAGCAGGCTGCGGTTATACAATATGACGGGATTAGGAAGCCATGGTTAGACATTGCAATGGGCAGATATAAAGGTTATTGGACCAAATTTTTGAATTTTGACCACCCTTTTCTACAACAGTGCAATCTCCAGCCATAG 1800 0.4056 MKLFRQRQRILILSLLFLSLVAPLIFLGRREFLEDLYRVTYRTDSLKLNAVGQIQQDAEELEEPNQVVYKEKDISTISYSSEKNNDAEEPRFSAVERNGFNHDERQDEDAQGKDLSSTDEDTNVNDVAHGTSKENIKVTNRPSGRIADLHHILNSNSRQVKNQKVQEIKDKILMAKAYLKLAPPSSNSHLKELELQMKEMERAVEGATRDSDLSRSVLQAMRHMDASLSTVSRSVSDCSMASKLQAMKRKTEDQVRFQRRQATYLVNLAVRTAQKNFHCLSMRLTAEYFALRPEERKLPNENKIHHPELYHYAVFSDNVLACAVVVNSTVSTAKEPGKLVFHIVTDSLNLPAISMWFLINSPGNATVHIQSIDNIEWLSKYNPFGKNGNSDPRYTSELIYLLFYLPDIFPALNKIVIFDHDVVVQQDLSGLWNVNMNGNVNGAVGTCQEGKTPFHRIDAFINFSDPLIGESFDVNSCTWAFGMNLFDLQQWRRQNLTAVYNKYSQMGSEKPLWNWNVARLPLGWITFYNKTEVLDRRWHILGLGHNSGVDRNEIEQAAVIQYDGIRKPWLDIAMGRYKGYWTKFLNFDHPFLQQCNLQP 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02858 599 Pfam Glycosyl transferase family 8 279 573 IPR002495 GO:0016757
Mepo4g02858 599 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 297 589 IPR029044 -
Mepo4g02858 599 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 390 597 IPR029993 GO:0047262
Mepo4g02858 599 Coils Coil 190 210 - -
Mepo4g02858 599 MobiDBLite consensus disorder prediction 97 132 - -
Mepo4g02858 599 MobiDBLite consensus disorder prediction 97 120 - -
Mepo4g02858 599 SUPERFAMILY Nucleotide-diphospho-sugar transferases 310 597 IPR029044 -
Mepo4g02858 599 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02858 Mepo-Chr4 37465523 37472208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02858 1 598 Glycosyltransferase AT1G06780 45.048 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02858 K13648 - gmx:100819255 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02858 4 37465523 37472208 Mepo4g02858 4 37465523 37472208 ECH
Mepo3g03084 3 41005414 41011860 Mepo4g02858 4 37465523 37472208 PCT