Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02515 ATGGCTTTTCCTTTCATATTTCTCTTTGCTAGTTTATTCTTTATAGCTCCTTCAAGCAATGCCTATTGGCCACCTTCCCCTGGTTACTGGCCAAGTTCCAAAGTCAGGTCTATGAGCTTTTACAATGGTTTTAGAAACCTTTGGGGACCTCAGCACCAAAGCGCGGATCAACATGGGACAACTATTTGGCTTGATAGAACCTCAGGAAGTGGATTCAAGTCGAATCGTCCATTTCGATCGGGATACTTTGGCGCATCGATTAAGCTTCATCCTGGCTACACTGCAGGAGTTATAACAGCTTTTTATCTTTCTAACAATGAAGCACATCCAGGATTTCATGATGAAGTAGACATTGAATTTCTAGGGACAACATTTGGAAAGCCTTATACTTTGCAGACAAATGTTTATATAAGAGGGAGTGGTGATGGAAAAATTATAGGCAGAGAAATGAAATTTCATCTGTGGTTTGACCCTACCAAAAAATTTCATCACTATGCTATACTTTGGAATCCTAAGGAAATAATATTCTTAGTGGATGATATGCCCATAAGGAGGTACCCTAGAAAGAGTGATGCAACATTTCCACTAAGACCGATGTGGGTTTATGGTTCAATTTGGGATGCTTCATCATGGGCAACAGAAGATGGAAAATACAAAGCTGATTACAAGTACCAACCTTTTGTTGCAAAGTACACAAACTTCAAGGCTAGTGGTTGCACAGCCTATGCATCACGTTGGTGCCGTCCGGCCACGGCCTCGCCGTATCGGTCCGGTGGGTTGACAAGACAACAACATTGGTCTATGAGTTGGGTTCAAAGACACCACATGGTTTATAACTATTGCCAAGATCCTAAAAGGGACCATAGACTAACACCTGAATGTTGGGGTTAA 891 0.4175 MAFPFIFLFASLFFIAPSSNAYWPPSPGYWPSSKVRSMSFYNGFRNLWGPQHQSADQHGTTIWLDRTSGSGFKSNRPFRSGYFGASIKLHPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFHLWFDPTKKFHHYAILWNPKEIIFLVDDMPIRRYPRKSDATFPLRPMWVYGSIWDASSWATEDGKYKADYKYQPFVAKYTNFKASGCTAYASRWCRPATASPYRSGGLTRQQHWSMSWVQRHHMVYNYCQDPKRDHRLTPECWG 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02515 296 PIRSF EndGlu_transf 7 296 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mepo4g02515 296 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 37 294 IPR044791 GO:0004553
Mepo4g02515 296 FunFam Xyloglucan endotransglucosylase/hydrolase 27 295 - -
Mepo4g02515 296 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 255 294 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Mepo4g02515 296 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 11 231 IPR000757 GO:0004553|GO:0005975
Mepo4g02515 296 SUPERFAMILY Concanavalin A-like lectins/glucanases 62 282 IPR013320 -
Mepo4g02515 296 Gene3D - 20 294 - -
Mepo4g02515 296 Pfam Glycosyl hydrolases family 16 42 223 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02515 Mepo-Chr4 33559468 33562090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02515 1 294 Glycoside Hydrolase AT3G44990 66.102 8.93e-142 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02515 K08235 - gmx:100796698 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02515 4 33559468 33562090 Mepo4g02515 4 33559468 33562090 ECH
Mepo3g03369 3 43793777 43796693 Mepo4g02515 4 33559468 33562090 PCT