Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02464 ATGCGTTTTCACACTCCAACGTTCTTCTTCTTGTTTGGATGCTGCATATTCACCTTCGTCGCCACGGCGGTTCGCGGCGCCGGTTTCCTTCCTCTACAACGAAACGTTCCTCTTAACCACCGCGTTGAGATAGACACGCTTAGAGCTCGTGACAGAGTTCGCCATGGTAGATTTTTGCGAGCTAGTGTTGGTGGTGTTGTCGACTTCAGAGTTCAAGGCTCTTCCGATCCATCCACTCTTGGGTACGGGCTGTATACTACCAAAGTAAAGATGGGAACTCCACCTAGGGAATTTACTGTTCAGATTGATACTGGAAGTGACATTTTGTGGATTAATTGCAATACTTGCAGTAATTGCCCTAAATCTAGTGGACTTGGGATTGAGCTCAATTTCTTTGACACGGTTGGTTCATCCACAGCTGCGCTGGTTCCTTGCTCGGACCCCATGTGCACTTCTGCAGTTCAAGGTGCGGCAGCTCAATGCTCCCCTCAGGTTAATCAGTGCAGCTACACCTTTCAGTATGAAGATGGGAGTGGTACTTCAGGTGTTTATGTCTCTGATGCCATGTATTTTGACATGATTCTCGGACAATCTACTCCTGCCAATTTTGCTTCTTCAGCTACCATTGTTTTCGGGTGTAGTACCTATCAGTCTGGAGATTTGACTAAGACGGATAAAGCGGTCGATGGAATTCTTGGGTTTGGCCCTGGTGATCTATCTGTTGTATCACAATTGTCATCACGAGGAATAACACCCAAAGTTTTCTCTCATTGCTTGAAAGGAGATGGCAATGGAGGAGGCATTCTAGTTCTTGGTGAGATTTTGGAGCCAAGTATTGTTTATAGTCCACTTGTCCCATCACAGCCTCATTACAACTTAAATCTTCAGAGCATTGCTGTCAACGGGCAAGTTCTCTCAATTAATCCAGCTGTATTTGCAACATCTGACAAACGAGGAACTATCATTGACAGTGGTACAACATTGTCATATCTTGTTCAAGAAGCTTATGATCCTTTTGTCAACGCAGTAGATACGGCCGTGTCACAATTTGCTACTTCCTTTATTTCAAAAGGAAGCCAGTGTTATCTGGTCTTAATCAGTATAGATGATAGTTTTCCTACAGTCAGTTTCAACTTTGAGGGTGGAGCATCAATGGATTTAAAACCATCACAATACCTTTTGAATAGGGGTTTCCAGGACGGTGCTAAAATGTGGTGCATAGGTTTCCAGAAAGTGCAAGAAGGAGTCACGATTTTAGGAGATCTTGTCCTGAAAGATAAGATAATTGTCTATGATTTGGCTCGTCAGCAAATAGGATGGACTAACTATGATTGTTCCATGTCTGTAAACGTCTCAGTGACTACAAGCAAGGATGAGTACATCAATGCAAGAGCAAGACAGACGGGCAGCAGCTCAAGGATAGGGATTCTCTCCAAGTTACTACCTTGCTTTGAGGGCACAGAAAAGTTCAGCTGTGGTCTTCAGCTCTTACTTTTTTAG 1500 0.4393 MRFHTPTFFFLFGCCIFTFVATAVRGAGFLPLQRNVPLNHRVEIDTLRARDRVRHGRFLRASVGGVVDFRVQGSSDPSTLGYGLYTTKVKMGTPPREFTVQIDTGSDILWINCNTCSNCPKSSGLGIELNFFDTVGSSTAALVPCSDPMCTSAVQGAAAQCSPQVNQCSYTFQYEDGSGTSGVYVSDAMYFDMILGQSTPANFASSATIVFGCSTYQSGDLTKTDKAVDGILGFGPGDLSVVSQLSSRGITPKVFSHCLKGDGNGGGILVLGEILEPSIVYSPLVPSQPHYNLNLQSIAVNGQVLSINPAVFATSDKRGTIIDSGTTLSYLVQEAYDPFVNAVDTAVSQFATSFISKGSQCYLVLISIDDSFPTVSFNFEGGASMDLKPSQYLLNRGFQDGAKMWCIGFQKVQEGVTILGDLVLKDKIIVYDLARQQIGWTNYDCSMSVNVSVTTSKDEYINARARQTGSSSRIGILSKLLPCFEGTEKFSCGLQLLLF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02464 499 Gene3D Acid Proteases 274 452 IPR021109 -
Mepo4g02464 499 Pfam Xylanase inhibitor N-terminal 85 272 IPR032861 -
Mepo4g02464 499 FunFam Aspartic proteinase-like protein 2 66 273 - -
Mepo4g02464 499 CDD pepsin_A_like_plant 85 445 IPR034161 -
Mepo4g02464 499 PRINTS Pepsin (A1) aspartic protease family signature 417 432 IPR001461 GO:0004190|GO:0006508
Mepo4g02464 499 PRINTS Pepsin (A1) aspartic protease family signature 320 331 IPR001461 GO:0004190|GO:0006508
Mepo4g02464 499 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Mepo4g02464 499 Pfam Xylanase inhibitor C-terminal 290 441 IPR032799 -
Mepo4g02464 499 PANTHER ASPARTYL PROTEASES 12 439 IPR001461 GO:0004190|GO:0006508
Mepo4g02464 499 ProSiteProfiles Peptidase family A1 domain profile. 85 441 IPR033121 -
Mepo4g02464 499 Gene3D Acid Proteases 68 273 IPR021109 -
Mepo4g02464 499 FunFam Aspartic proteinase-like protein 2 274 452 - -
Mepo4g02464 499 SUPERFAMILY Acid proteases 81 449 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02464 Mepo-Chr4 32841740 32846408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02464 58 446 Miscellaneous Gene Families AT1G44130 27.494 1.79e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02464 - - mtr:11430510 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02464 4 32841740 32846408 Mepo4g02464 4 32841740 32846408 ECH
Mepo3g03412 3 44149611 44154821 Mepo4g02464 4 32841740 32846408 PCT