Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02053 ATGCAGAGGCCACCGCCTGAAGATTTTCTGTTGAAAGAGACCAAACCCCATCTTGGAGGGGGAAAAATCTCTGGCGACAAACTAACCAGCACCTATGACCTTGTTGAGCAGATGCAATACCTTTATGTGAGGGTCGTTAAGGCTAAGGATTTGCCTTCAAAGGATGTTACCGGAAGTTGTGATCCGTACGCTGAAGTTAAGCTCGGGAACTATAAAGGAACTACTCGGCATTTTGAGAAGAAAACCAATCCTGAATGGAATCAGGTTTTTGCTTTCTCGAAGGACCGCCTTCAGGCCTCGGTGTTGGAGGTTACTGTGAAAGATAAGGATGTTGTGAAGGACGACTTCATTGGTCGTGTGTGGTTTGATTTGAATGAGGTTCCGAAACGGGTTCCCCCAGATAGTCCTTTGGCGCCACAATGGTATAGATTGGAGGATAGAAAGGGTGATAAGGTTAAGGGAGAGTTAATGCTGGCTGTTTGGATGGGTACACAGGCTGATGAAGCATTTCCGGAAGCTTGGCACTCGGATGCCGCAACTGTTAGTGGAACCGATGCTCTTGCAAATATTAGGTCGAAAGTTTATTTATCTCCTAAGCTTTGGTATTTGAGGGTTAATGTGATTGAGGCACAAGACTTACAGCCAACTGATAAGGGTAGATATCCGGAAGTTTTTGTGAAGGCTATTTTGGGGAATCAGGCATTGAGGACTAGAATCTCTCAGAGCAGGAGTATCAATCCGTTGTGGAATGAGGATTTAATGTTCGTTGCTGCAGAACCATTCGAGGAGCCGCTGATTTTGAGTGTGGAAGACAGAGTTGCTCCAAACAAAGAAGAAGTATTGGGGAGGTGTGCAATTCCTTTGCAGTTTATGGATAGGAGACTCGACCACAAACCGGTGAATACTAGGTGGTTTAATCTTGAAAAACATATCATTGTAGAAGGGGAAAAGAAGAAAGAAATTAAATTTGCAAGTAGGATTCACATGAGGGTTTGTCTAGAAGGTGGTTATCATGTTTTGGATGAATCAACTCACTACAGCAGTGATCTTCGCCCGACGGCCAAACAGCTCTGGAAATCTGGAATTGGTGTTCTTGAAGTTGGGATATTGAGTGCTCAGGGTTTGATGCCAATGAAAAATAAAGATGGGAGGGGGACAACTGATGCTTATTGTGTAGCGAAATATGGGCAGAAGTGGATTCGAACAAGGACAATCATTGATAGCTTTATGCCGAGGTGGAATGAGCAATATACTTGGGAGGTTTTTGATCCTTGCACTGTGATTACAATTGGTGTATTTGATAATTGTCATTTGCATGGTCCTGACAAAGCTGGAGGTGCAAAAGATGCAAGGATTGGTAAGGTAAGGATTCGTCTTTCGACACTCGAGACAGATCGGGTGTACACACATTCCTATCCACTCCTAGTTCTTCACCCGAATGGTGTGAAGAAAATGGGTGAAATTCAATTGGCTGTGAGGTTCACTTGTTCTTCTTTGCTCAACATGATGCACATGTATTCACTACCTCTGTTGCCAAAGATGCACTATATACACCCATTGACTGTTAGCCAGCTTGACAGTTTGAGGCATCAAGCCACTCAGATAGTTTCAATGAGGCTGAGTCGTGCTGAGCCGTCGCTGAGAAAGGAGGTAGTTGAGTATATGCTTGATGTTGGTTCCCACATGTGGAGTATGAGAAGAAGCAAGGCTAATTTCTTCAGAATCATGGGAGTATTGAGTGGACTAATTGCTGCGGGAAAATGGTTCGATCAAATTTGCAATTGGAAAAATCCAATTACAACAGTTCTGATTCATATCTTGTTTATAATATTGGTCATGTATCCTGAACTTATCTTACCTACAGTTTTCCTTTACCTCTTCCTGATTGGAATTTGGCACTATAGATGGAGGCCAAGACACCCTCCTAACATGGACACTCGGCTCTCTCACGCCGATTCAGCTCATCCGGATGACCTTGATGAAGAGTTCGACACATTCCCGACTTCACGGCCTTCTGAAATTGTTCGGATGAGATATGATCGACTAAGAAGCATAGCTGGTAGGATACAGACTGTGGTTGGCGACTTAGCTACTCAAGGGGAAAGGCTGCAGTCTTTGCTGAGCTGGCGTGATCCAAGAGCAACGGCACTGTTTGTGATTTTCTGTCTGCTTGCTGCTACTATACTGTATGTGACTCCATTCCAAGTTGTGGCCCTTCTGACTGGAATTTATGTGTTGAGACATCCGAGGTTCCGTCATAAGCTTCCGTCGGTACCGCTTAATTTCTTCAGGAGGCTGCCTGCAAGAACTGATTGCATGCTTTGA 2325 0.4426 MQRPPPEDFLLKETKPHLGGGKISGDKLTSTYDLVEQMQYLYVRVVKAKDLPSKDVTGSCDPYAEVKLGNYKGTTRHFEKKTNPEWNQVFAFSKDRLQASVLEVTVKDKDVVKDDFIGRVWFDLNEVPKRVPPDSPLAPQWYRLEDRKGDKVKGELMLAVWMGTQADEAFPEAWHSDAATVSGTDALANIRSKVYLSPKLWYLRVNVIEAQDLQPTDKGRYPEVFVKAILGNQALRTRISQSRSINPLWNEDLMFVAAEPFEEPLILSVEDRVAPNKEEVLGRCAIPLQFMDRRLDHKPVNTRWFNLEKHIIVEGEKKKEIKFASRIHMRVCLEGGYHVLDESTHYSSDLRPTAKQLWKSGIGVLEVGILSAQGLMPMKNKDGRGTTDAYCVAKYGQKWIRTRTIIDSFMPRWNEQYTWEVFDPCTVITIGVFDNCHLHGPDKAGGAKDARIGKVRIRLSTLETDRVYTHSYPLLVLHPNGVKKMGEIQLAVRFTCSSLLNMMHMYSLPLLPKMHYIHPLTVSQLDSLRHQATQIVSMRLSRAEPSLRKEVVEYMLDVGSHMWSMRRSKANFFRIMGVLSGLIAAGKWFDQICNWKNPITTVLIHILFIILVMYPELILPTVFLYLFLIGIWHYRWRPRHPPNMDTRLSHADSAHPDDLDEEFDTFPTSRPSEIVRMRYDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVIFCLLAATILYVTPFQVVALLTGIYVLRHPRFRHKLPSVPLNFFRRLPARTDCML 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02053 774 ProSiteProfiles C2 domain profile. 22 142 IPR000008 -
Mepo4g02053 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 354 IPR035892 -
Mepo4g02053 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 40 177 IPR035892 -
Mepo4g02053 774 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Mepo4g02053 774 CDD C2C_MCTP_PRT_plant 202 352 IPR047258 -
Mepo4g02053 774 FunFam C2 domain-containing protein 188 333 - -
Mepo4g02053 774 SMART C2_3c 40 136 IPR000008 -
Mepo4g02053 774 SMART C2_3c 364 471 IPR000008 -
Mepo4g02053 774 SMART C2_3c 202 300 IPR000008 -
Mepo4g02053 774 Gene3D C2 domain 188 331 IPR035892 -
Mepo4g02053 774 Gene3D C2 domain 24 162 IPR035892 -
Mepo4g02053 774 FunFam C2 domain-containing protein 35 179 - -
Mepo4g02053 774 Pfam C2 domain 363 474 IPR000008 -
Mepo4g02053 774 Pfam C2 domain 201 307 IPR000008 -
Mepo4g02053 774 Pfam C2 domain 40 142 IPR000008 -
Mepo4g02053 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 504 IPR035892 -
Mepo4g02053 774 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 6 774 IPR047259 -
Mepo4g02053 774 FunFam C2 domain-containing protein 346 498 - -
Mepo4g02053 774 Gene3D C2 domain 361 498 IPR035892 -
Mepo4g02053 774 Pfam Plant phosphoribosyltransferase C-terminal 619 774 IPR013583 -
Mepo4g02053 774 CDD C2B_MCTP_PRT_plant 40 164 IPR047257 -
Mepo4g02053 774 CDD C2D_MCTP_PRT_plant 364 491 IPR047255 -
Mepo4g02053 774 ProSiteProfiles C2 domain profile. 346 472 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02053 Mepo-Chr4 27218913 27222688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02053 1 774 Lipid Metabolism Gene Families AT3G57880 91.214 0.0 1489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02053 - - zju:107407989 1491.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02053 4 27218913 27222688 Mepo5g02917 5 35628052 35630791 ECH
Mepo4g02053 4 27218913 27222688 Mepo4g02053 4 27218913 27222688 ECH
Mepo3g02912 3 39248272 39252027 Mepo4g02053 4 27218913 27222688 PCT