Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01985 ATGCCAATTTCACCAGCAGCTGTGATTATCCCATTGGGTATTCTCTTCTTCGCTTCTGGTCTCATCGTTAACATCATTCAGGCAACATGCTTTGTGATTTTGAGACCCTTTTCAAAGAATTTGTACAGACGGATCAACAGGATGGTGGCAGAACTCCTTTGGCTCGAGCTTGTTTGGATTTTTGATTGGTGGGCTGGTGTCAAGATCCAAGTATTCACAGATCCCGAAACCTTTCGTTTCATGGGTACGGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATCGATTGGCTTGTTGGATGGATTTTAGCTCAGCGTTCAGGATGCCTTGGTAGCACGCTAGCTGTGATGAAGAAATCATCTAAGTTTCTGCCGGTCATTGGGTGGTCAATGTGGTTTTCTGAATATCTTTTCTTGGAGAGAAATTGGGCCAAGGATGAAAGGACATTAAAGTCAGGCCTACAGCAACTGAGGGATTTCCCTCTTCCCTTTTGGCTAGCTCTCTTTGTAGAAGGAACTCGCTTTACACAGGCCAAACTATTAGCCGCTCAGGAATATGCAACCTCAACTGGATTGCCCGTTCCTAGAAACGTTTTGATTCCAAGAACTAAGGGGTTTGTTTCTGCAGTAAGTCATATGCGCTCATTTGTTCCAGCCATTTATGACGTAACAGTGGCAATTCCCAAGACTTCACCCCCTCCTACAATGCTAAGACTCTTCACAGGGCAACCTTCGGTGGTTCATGTGCATATTAAACGGCATTTGATGAAGGATTTGCCAGAAGCAGAGGAAGCTGTTGCTCAATGGTGTAGAGACATATTTGTGGCTAAGGATGCTTTGTTAGACAAACATACTGCTGATGACAAATTCAGGGATCACGAGCCACGGGATCTCGGTCGACCAATAAAGTCTCTTCTGGTTGTCGTGACATGGATTTGTGTAGTCGTTGCGGGGACTGTTAAGTTGCTTCAATGGTCTTCACTACTATCCTCTTGGAAGGGTGTTGCATTTTCAGTATTTAGTTTGGCAATTGTCACCGCACTCATGCAATTCTTGATTAAGTTCTCACAATCTGAGCGTTCAAACCCTGCAAAGGTATCCCCTTCAAAGTCCAAAAGTAGAGAAGAATTGCAGGGTAGTGATGACAAACAAGAGTAG 1161 0.4436 MPISPAAVIIPLGILFFASGLIVNIIQATCFVILRPFSKNLYRRINRMVAELLWLELVWIFDWWAGVKIQVFTDPETFRFMGTEHALVISNHRSDIDWLVGWILAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDERTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKTSPPPTMLRLFTGQPSVVHVHIKRHLMKDLPEAEEAVAQWCRDIFVAKDALLDKHTADDKFRDHEPRDLGRPIKSLLVVVTWICVVVAGTVKLLQWSSLLSSWKGVAFSVFSLAIVTALMQFLIKFSQSERSNPAKVSPSKSKSREELQGSDDKQE 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01985 386 SMART plsc_2 86 208 IPR002123 GO:0016746
Mepo4g01985 386 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 57 290 - -
Mepo4g01985 386 CDD LPLAT_LCLAT1-like 58 253 - -
Mepo4g01985 386 Pfam Acyltransferase 83 228 IPR002123 GO:0016746
Mepo4g01985 386 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 9 352 - -
Mepo4g01985 386 MobiDBLite consensus disorder prediction 359 386 - -
Mepo4g01985 386 MobiDBLite consensus disorder prediction 370 386 - -
Mepo4g01985 386 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01985 Mepo-Chr4 25817382 25826245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01985 6 385 Miscellaneous Gene Families AT3G57650 74.211 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01985 K13523 - gmx:100814107 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01985 4 25817382 25826245 Mepo4g01985 4 25817382 25826245 ECH
Mepo3g02886 3 38992375 38998225 Mepo4g01985 4 25817382 25826245 PCT