Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01092 ATGTCTTTTCAGTGTATGAGCTGCAAACAACTAAGAACTGTTATACTCTTTCAAGGCAAGACTGGTTATTCAAACCCTTTCAACACTAAAATGAGGCGTTGTAATTTTCTCCCTTTTAAGTTTTCGAAAATGTGTTACCGGATGAAGCATAAATTTACAGACCAGAAGGTTGTTGAAATAGACCAGCACGGTGTAAAGAGCACTGTAAAGTTGCGTAAGAAGGTATTTGCTCTTATGGATCACAACATCCCTGATCTAATTGGAAATGGAAGCGGTGAAATGAAATCTAAAATGAATCGGAAAGATGCTGTAGATGATTACGACATCTCCTTGATGTGTAGGATATTTCCATCAATTACTTTGGGTAGTGCTCCTCAAGTGGGTTTGTATGATGGGACCACAACATATTCTGAAACAAATATCATTTCGGCAACCAAAGATTTTGAACAACATTTATATGATTCTTCAGAGGTAAGAGATGTGCAAAATACCGTCTCTGAAGCATCACCTTCTTTGTATGTCAATCGTTCTACATCTTCACCATTACGAAAAGATGATTCTTTTCCCTGTTCTTTAACACCTCAATCAGTGTCTTCAATATATGAGGAAAAATTGGATCAAGTTACTAGGGAAGATTCTCGAAAGAAAGTGAGGTTGCAGTCACAGTCAAACCTTACACTTAATGAGTTATCTCTCGACACATCTGTCAATTGCTTACCTGGATTAACTAAGAAGCAACGTGAGCAACTAGATAACTGTGGGTTTCACACGTTACGGAAATTGCTGCACCATTTTCCACGATCATATGCTAATCTACAGAATGCACATGGGAACATTTATGATGGGCAGTATTTGATCTTTGTTGGAGAAATCTTATCTTCAAGGGGAGTCAAAGCTAATTGTTCAATTTCATTACTTGAGGTGATTGTTGGTTGTCAGATTGCAGACAAGGAATCGGATATTGAGCATGTGACCGACAAAGTTGGGAAAACAAAGACAGTTTATTTGCATTTGAAGAGATTTTTCCGTGGCACACGTTTTACTTCTCAAGGTTTCCTAAATAGTATTGCGAGCAAGTATCAAGTGAGAGACATAGTATGTGTGAGTGGCAAGGTTAACACTATGTCTACTAAAGATCACTACGAGCTAAGAGAATTTAATATTGACGTGCTTGAAGATAGGAAAGATTTATCCCTTTGCGCTAAAGAGAGGTCATATTGTATCTACCCTTCAAAAGGGGGTTTGAACCCAACATTCCTTCGGGACATCATTGCAAGAGCCTTACATGCCTTGCCAGTCATTGTTGATCCAATTCCTAAAGACATTAGAGAGGAACTTGGACTCTTAAGTCTTCATGATGCATATTTTGGAATTCACAAACCAAAGGATATTAGTGAAGCTGATCTGGCCCGCAAGAGACTTATATTTGATGAATTTTTTTACCTGCAGTTAGGACAATTATTCCAAATGCTCGAAGGTCTTGGTACACAAGTAGAAAAGGTTGGGTTGCTAGATAAGTATAGAAAACCAGAAAATAACACTGTGTGTACAAAGGAATGGTCCTGTCTCACCAAGAAGGTTTTGGAGCTCCTTCCCTATACTCTTACTTCCGGTCAACTGCAAGCTGTTTCAGAAATTATTTGGGATTTAAAAAGGCCGGTTCCAATGAATCGGCTACTTCAGGGTGATGTTGGATGTGGGAAAACTATTGTTGCTTTTCTTGCATGCATGGAAGTTATTGGCTCTGGCTATCAGGCGGCTTTCATGGTTCCATCTGAGTTGGTTGCAATCCAGCATTATGAACACTTGCTTGCATTGCTTGAAAACTTGGACGAGGTCAAGTTCAAGCCAACTGTTGCTTTACTCACTGGTTCAATCCCACTAAAACAATCGCGGATTATTCGCAAGGGTATCCAGACCGGAGAAATTTCAATCGTCATTGGAACCCATAGTTTGTTTGCAGATAGCATTGAATTCTCAGCCTTACGTATTGCTGTGGTGGATGAGCAGCATCGCTTTGGTGTGATTCAAAGAGGAAGATTTAACAGTAAGTTATTTTATAAATCTTCAATTTCAAGTCTGGAGGATGCTATTACAGACAAGTCCTCAAAGACTGATGATTATATGGCTCCACATGTTCTTGCCATGTCTGCTACTCCCATCCCAAGGACCCTTGCACTTGCTTTATATGGTGATATGTCACTGACACAGATAACTGACTTACCACCAGGAAGGATTCCTGTTCAAACATATGCCATTGAGGGAAGTGACAAAGGATTTGAGGATGCCTACAAGATGATGATGGATGAGTTGGAAGATGGGGGAAAAGTTTATCTTGTCTACCCAATTATCGAACTTTCGGAGCAGTTACCTCAGCTTCGTGCTGCTTCTGCAGATCTCAAAGTTATCTCAGACCGGTTTCCAGGATACAATTGTGGTTTATTACATGGGAGAATGAGAAGTGAAGAAAAAGAAGAAACGTTAGGGAAGTTTAGGACTGGAGAATTGAATATACTACTTGCCACTCAAGTAATTGAAGTTGGTGTTGATGTTCCAGATGCGTCGATGATGGTTGTGATGAATTCTGAGAGGTTTGGAATGGCCCAATTACACCAACTCAGGGGCCGAGTTGGACGCGGAACAAGGCAGTCAAAATGTATATTAATATCATCAACTGCCAGTGGCCTTAATCGTTTGAAAGTACTGGAGCAATCATCAGATGGGTTTCATCTTGCTAATATGGACCTATTATTACGTGGACCTGGTGACTTGCTTGGCAAGAAACAATCTGGACATCTTCCCGAGTTTCCTATTACCAGATTGGAAGTCGACGGCAATATTTTACAAGACGCACATGTTGCTGCACTGAAAATCTTGAGTGCTTCTCATGATCTGGAGCAATTTCCTGCACTTAAACTGGAGCTTGGCATGAGACAGCCGCTTTGCCTGCTAGGTGATTGA 2961 0.4032 MSFQCMSCKQLRTVILFQGKTGYSNPFNTKMRRCNFLPFKFSKMCYRMKHKFTDQKVVEIDQHGVKSTVKLRKKVFALMDHNIPDLIGNGSGEMKSKMNRKDAVDDYDISLMCRIFPSITLGSAPQVGLYDGTTTYSETNIISATKDFEQHLYDSSEVRDVQNTVSEASPSLYVNRSTSSPLRKDDSFPCSLTPQSVSSIYEEKLDQVTREDSRKKVRLQSQSNLTLNELSLDTSVNCLPGLTKKQREQLDNCGFHTLRKLLHHFPRSYANLQNAHGNIYDGQYLIFVGEILSSRGVKANCSISLLEVIVGCQIADKESDIEHVTDKVGKTKTVYLHLKRFFRGTRFTSQGFLNSIASKYQVRDIVCVSGKVNTMSTKDHYELREFNIDVLEDRKDLSLCAKERSYCIYPSKGGLNPTFLRDIIARALHALPVIVDPIPKDIREELGLLSLHDAYFGIHKPKDISEADLARKRLIFDEFFYLQLGQLFQMLEGLGTQVEKVGLLDKYRKPENNTVCTKEWSCLTKKVLELLPYTLTSGQLQAVSEIIWDLKRPVPMNRLLQGDVGCGKTIVAFLACMEVIGSGYQAAFMVPSELVAIQHYEHLLALLENLDEVKFKPTVALLTGSIPLKQSRIIRKGIQTGEISIVIGTHSLFADSIEFSALRIAVVDEQHRFGVIQRGRFNSKLFYKSSISSLEDAITDKSSKTDDYMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVQTYAIEGSDKGFEDAYKMMMDELEDGGKVYLVYPIIELSEQLPQLRAASADLKVISDRFPGYNCGLLHGRMRSEEKEETLGKFRTGELNILLATQVIEVGVDVPDASMMVVMNSERFGMAQLHQLRGRVGRGTRQSKCILISSTASGLNRLKVLEQSSDGFHLANMDLLLRGPGDLLGKKQSGHLPEFPITRLEVDGNILQDAHVAALKILSASHDLEQFPALKLELGMRQPLCLLGD 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01092 986 Gene3D - 492 739 IPR027417 -
Mepo4g01092 986 SMART helicmild6 784 881 IPR001650 -
Mepo4g01092 986 PANTHER ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC 31 981 IPR047112 GO:0006281
Mepo4g01092 986 Pfam ATP-dependent DNA helicase RecG, domain 3, C-terminal 906 964 IPR045562 -
Mepo4g01092 986 SUPERFAMILY Nucleic acid-binding proteins 230 432 IPR012340 -
Mepo4g01092 986 CDD DEXHc_RecG 474 742 - -
Mepo4g01092 986 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 549 738 IPR014001 -
Mepo4g01092 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 742 IPR027417 -
Mepo4g01092 986 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 759 917 IPR001650 -
Mepo4g01092 986 Gene3D - 748 919 IPR027417 -
Mepo4g01092 986 Pfam DEAD/DEAH box helicase 556 723 IPR011545 GO:0003676|GO:0005524
Mepo4g01092 986 Pfam Helicase conserved C-terminal domain 769 880 IPR001650 -
Mepo4g01092 986 NCBIfam ATP-dependent DNA helicase RecG 253 954 IPR004609 GO:0003678|GO:0006281|GO:0006310
Mepo4g01092 986 SMART ultradead3 531 749 IPR014001 -
Mepo4g01092 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 742 935 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01092 Mepo-Chr4 14410222 14431736 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01092 K03655 - gmx:100806552 1441.79