Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01008 ATGCATATTCAAACTTGTCACTCAATTAAGACACTTCCATTAACATGGAACATTCCAAAAACCATCAACCACCGACCACATCGCCACCTATTACCACCACCAAAATCCACCGTCACCACCATACCGCCACCACTAAAAACCTCAAAAACTCACTCAATGCCACCAGAAAAGCTAGAAATTTTCAAGTCACTAGAAAACTGGGCTTCTGAGTCTGTTTTACCACTACTAAAGCCTGTGGAACAATGCTGGCAGCCACAGAATTTTCTCCCTGATCCTTCATTGCCATTTGATGAATTTACGGATCAGGTGAAGGTCCTTCGTGATCGCACGAAGGACCTTCCTGATGAGTATTTTGTTGTGTTGGTGGGTGATATGGTGACGGAAGACGCGCTTCCTACGTATCAGAGTATGATTAATGGTCTTGATGGTGTTGGTGATGAGATTGGTGCCAGTCCAAGCCCGTGGGCCGTTTGGACACGGGCTTGGACTGCTGAAGAAAATAGACATGGGGATTTGCTTAGGACTTATTTGTATCTTTCTGGAAGAGTTGATATGGAGATGATTGAGAAAACTGTTCAGTATCTCATTGGAGCTGGCATGGACCCCGGGACAGAAAACAACCCATACTTGGGATTTGTATACACATCATTCCAAGAGCGAGCAACATTTGTATCACACGGAAACACGGCTCGCTTAGCGAAAGAAGGCGGCGATCCAGTGCTTGCGCGCATATGTGGTACCATCGCAGCCGATGAAAAGCGTCACGAGAATGCATACTCAAAAATCGTCGAGAAGCTTCTAGAAGTGGACCCAACAGGAGCAATGCTAGCCATTGGTGATATGATGGAGAAAAAGATCACAATGCCGGCACACCTTATGTATGATGGACAAGACCCCAAGCTATTCGAGCACTTCGCGGCCGTGGCCCAGCGCACCGGAGTTTACACGGCCAACGATTACGCTGATATTTTGGAGTTTTTAATCGAACGGTGGAGATTGGAGAAGCTTGAAGGATTAACGGGTGAGGGAAAAAGGGCGCAGGATTTTGTGTGTGGATTAGCACCTAGGATTAGAAGGTTGCAAGAAAGGGCTGATGCACGTGCTCGTAAGATGAAACCACATGGGGTCAAGTTTAGTTGGATTTTTAATAATGAGGTTGTTTTGTGA 1167 0.461 MHIQTCHSIKTLPLTWNIPKTINHRPHRHLLPPPKSTVTTIPPPLKTSKTHSMPPEKLEIFKSLENWASESVLPLLKPVEQCWQPQNFLPDPSLPFDEFTDQVKVLRDRTKDLPDEYFVVLVGDMVTEDALPTYQSMINGLDGVGDEIGASPSPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMEMIEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYSKIVEKLLEVDPTGAMLAIGDMMEKKITMPAHLMYDGQDPKLFEHFAAVAQRTGVYTANDYADILEFLIERWRLEKLEGLTGEGKRAQDFVCGLAPRIRRLQERADARARKMKPHGVKFSWIFNNEVVL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01008 388 SUPERFAMILY Ferritin-like 46 387 IPR009078 -
Mepo4g01008 388 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 46 386 IPR005067 GO:0006631|GO:0045300
Mepo4g01008 388 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 42 388 - -
Mepo4g01008 388 Pfam Fatty acid desaturase 56 382 IPR005067 GO:0006631|GO:0045300
Mepo4g01008 388 MobiDBLite consensus disorder prediction 25 52 - -
Mepo4g01008 388 PIRSF Dlt9_acylACP_des 19 388 IPR005067 GO:0006631|GO:0045300
Mepo4g01008 388 Gene3D Ribonucleotide Reductase, subunit A 43 388 IPR012348 GO:0016491
Mepo4g01008 388 CDD Acyl_ACP_Desat 56 364 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01008 Mepo-Chr4 13320679 13322960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01008 33 386 Acyl Lipid Metabolism Gene Families AT1G43800 77.933 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01008 K03921 - gmx:100037478 649.432