Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo4g00825 | ATGGCGATCATCTCCGATTACCAAGACGATAACCAAACCAAAACTTCATCATCATCATCATCTTCTCAACCAAAACCCTCAAAACCTATCCCCTTCTCTTCCACCTTCGATCCTTCAAACCCTACCGCTTTTCTTGAAAAGGTATTCGACTTCATCGCTAAGGAAAGTACCGGTTTCTTCGATAACGATTCCGCCGAGAAGGTGGTTTTGTCTGCTGTTCGCGCTGCTAGGGTTAAGAAAGCTAAGGCTGTTGCTGCGAAGAAGGCTAAGATTGCTGCCAAGGAGAAAGCAAAGGCTGCTGCTGAGAAAAAACTGAACGATGAGAAGTCCGGAGCGGCGACCGAGAAGGCTGATGAGAAGGCTGCACCAAATCAGGGTAATGGTATGGATTTGGAGAAGTATTCCTGGACTCAAACTTTGCAAGAGCTCAATGTGAATGTTCCGGTGCCAAATGGAACAAAATCAGGGTTTGTCATCTGTGAGATTAAGAAGAACCATCTAAAAGTTGTACTCAAAGGGCAGCCACCAATTATTGATAGGGAGCTATATAAATCTATCAAGCCTGATGAATGTTATTGGAGCATAGAGGATCAGAATACAGTTTCTATTCTTTTAACCAAGCATGATCAAATGGACTGGTGGAAATGTCTTGTTAAGGGTGATCCTGAAATTAACACCCAAAAAGTTGAACCTGCAAGCAGCAAACTTGGTGACCTGGATTCTGAGACTCGAATGACCGTTGAAAAGATGATGTTTGATCAGAGGCAAAAGTCTATGGGCCTTCCTACAAGCGAGGAGCTTCAGAAAGAGGAAATGATGAAGAAATTTATGAGCCAGCATCCTAATATGGACTTCTCGAGTGCAAAGTTTCAGTAG | 876 | 0.4338 | MAIISDYQDDNQTKTSSSSSSSQPKPSKPIPFSSTFDPSNPTAFLEKVFDFIAKESTGFFDNDSAEKVVLSAVRAARVKKAKAVAAKKAKIAAKEKAKAAAEKKLNDEKSGAATEKADEKAAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSGFVICEIKKNHLKVVLKGQPPIIDRELYKSIKPDECYWSIEDQNTVSILLTKHDQMDWWKCLVKGDPEINTQKVEPASSKLGDLDSETRMTVEKMMFDQRQKSMGLPTSEELQKEEMMKKFMSQHPNMDFSSAKFQ | 291 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo4g00825 | 291 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Mepo4g00825 | 291 | MobiDBLite | consensus disorder prediction | 101 | 116 | - | - | |
| Mepo4g00825 | 291 | SUPERFAMILY | HSP20-like chaperones | 116 | 231 | IPR008978 | - | |
| Mepo4g00825 | 291 | Gene3D | - | 125 | 252 | IPR008978 | - | |
| Mepo4g00825 | 291 | Coils | Coil | 84 | 104 | - | - | |
| Mepo4g00825 | 291 | FunFam | Nuclear migration protein nudC | 125 | 252 | - | - | |
| Mepo4g00825 | 291 | CDD | p23_NUDC_like | 134 | 218 | - | - | |
| Mepo4g00825 | 291 | PANTHER | NUCLEAR MOVEMENT PROTEIN NUDC | 37 | 287 | IPR037898 | - | |
| Mepo4g00825 | 291 | MobiDBLite | consensus disorder prediction | 101 | 129 | - | - | |
| Mepo4g00825 | 291 | Pfam | CS domain | 133 | 207 | IPR007052 | - | |
| Mepo4g00825 | 291 | ProSiteProfiles | CS domain profile. | 129 | 218 | IPR007052 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo4g00825 | Mepo-Chr4 | 10774025 | 10776639 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo4g00825 | K25866 | - | tpra:123893469 | 396.741 |