Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00742 ATGCTTCTAACTCACGCTTTCTCTTCACTTCATTCTTCATACATTCCCATTTCTTCTTGTTCTTCATCTTCTCCAATACGACGTCGTTTATTTACCACTCCTTGCAAAACGAATCTGAAACACCTCACTTCACGCATAGTTCAACTCACTCGCCGAAAACAGCTTCGTCAGATTCTGAATGAAATTGAAGTTGCAAAGAAACGTTTTGGAAAATTGAATACGATTGTTATGAATGCGGTTATGGAAGCTTGTGTTCGTTGCGGTGATATCGATTCAGCTTTGAAGATTTTCGATGAAATGAAAAGTCCTGATGCTTGTGGTGTTGATACTGTTACCTATGCTACGCTTTTGAAGGGTTTAGGCAAGGCACATAGATTTGATGAAGCTTTTCGATTGCTTGAATCTGTCGAAAATGGTACTGCCGTGGGAAGTCCAAAGTTGTCAGCACCATTGGTCTATGGTTTACTAAATGCCTTAGCAGAAGCAGGAGACCTGCGTCGTGCAAATGGCCTCCTTGCCTGTTATGGTTCTGTGCTTCGTGAAGGCGAACATTTTTCAGTCTCAGTATACAACCTTCTAATAAAGGGGCATATAAACTCAGGCTGTCCTCATACTGCAATAAACATGCTCAATGAAATTTTACATCAAGGAATAATGCCTGACAGGCTCACATATAACACACTAATTTTAGCATGTGTTCAGAGTGAAAAGTTGGATGTTGCCATGCAATTATTTGGGGAAATGAAGGAAAAAGCGCAGGAATTCATCCATGATGATCTGTTTCCAGATATCGTTACATACACAACATTGCTCAAGGGTTTGGGGCAGGCAAAGGATCTCGTTTCAGTTATGCAAATAGTGCTGGAGATGAAATCATGTTCTCAGTTATACATTGATAGAACTGCTTACACTGCAATAGTTGATGCTTTACTAAAATGTGGCTCAGTTAAGGGTGCTCTGTGTATTTTTGGAGAAATACAGAAACAGGTTGGTTGGAATCCAGAGTTGAGACCGAAGCCTCATCTCTATCTTTCCATGATGCGTGCCTTTGCTTTTAGAGGAGATTATGATCTGGTTAAAAATTTGCATAAGCGGATTTTGTCAGATACTTCAGGAACAATCTTACCAGTTTCCCAAGAAGAAGCTGACCACCTTCTAATGGAAGCAGCCCTGAACGCTGGCCAGGTTGATGTTGCTACTAAAACTCTTCTGTATATTGTTTCAAGATGGAAGGGCATATCCTGGACAAGTCATGGAGGCATGGTTGCTTCTCGTATTGAGGCCTTATCAGGATTCTCAGCATCTTTATTCAATCCTTTCTTACTTCCACAGGTTTCACCTTCTGAACCGATTGAGGGCTTCATGATGCCATTTAAAGCAACACGGCCCCTACTAGGTACCATAAAGCTGAAGGATGTGGTATCACGTTTCTTCAATGATGCAGTAGTTCCTATTGTAGATGAGTGGGGAAGCTGTACAGGGCTTTTGCACCGCGAAGACTGCAATCAGTTGGATGCTCCACTTTCAACAATGATGAGAAGCCCTCCTCCCAGTGTTATAGCTTCAACATCTGTTGGTCATGTAATTGATTTAATTTTGGAGAAGGGTTACCCAATGGTTATCATTGTAAATTGCACCGACTCATATGCTACTTCATACGGCTGTAGAGCAGTTGGAGTTTTTACATTAGAACAATTGAATAGGCTCATCAAACCTGTATCAGAAGTGAAAGAGACAGATCTTTCACTCTGCAGAACATAG 1761 0.4123 MLLTHAFSSLHSSYIPISSCSSSSPIRRRLFTTPCKTNLKHLTSRIVQLTRRKQLRQILNEIEVAKKRFGKLNTIVMNAVMEACVRCGDIDSALKIFDEMKSPDACGVDTVTYATLLKGLGKAHRFDEAFRLLESVENGTAVGSPKLSAPLVYGLLNALAEAGDLRRANGLLACYGSVLREGEHFSVSVYNLLIKGHINSGCPHTAINMLNEILHQGIMPDRLTYNTLILACVQSEKLDVAMQLFGEMKEKAQEFIHDDLFPDIVTYTTLLKGLGQAKDLVSVMQIVLEMKSCSQLYIDRTAYTAIVDALLKCGSVKGALCIFGEIQKQVGWNPELRPKPHLYLSMMRAFAFRGDYDLVKNLHKRILSDTSGTILPVSQEEADHLLMEAALNAGQVDVATKTLLYIVSRWKGISWTSHGGMVASRIEALSGFSASLFNPFLLPQVSPSEPIEGFMMPFKATRPLLGTIKLKDVVSRFFNDAVVPIVDEWGSCTGLLHREDCNQLDAPLSTMMRSPPPSVIASTSVGHVIDLILEKGYPMVIIVNCTDSYATSYGCRAVGVFTLEQLNRLIKPVSEVKETDLSLCRT 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00742 586 SUPERFAMILY CBS-domain pair 482 569 IPR046342 -
Mepo4g00742 586 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 221 255 IPR002885 -
Mepo4g00742 586 NCBIfam pentatricopeptide repeat 224 251 IPR002885 -
Mepo4g00742 586 NCBIfam pentatricopeptide repeat 189 221 IPR002885 -
Mepo4g00742 586 NCBIfam pentatricopeptide repeat 265 293 IPR002885 -
Mepo4g00742 586 NCBIfam pentatricopeptide repeat 111 135 IPR002885 -
Mepo4g00742 586 NCBIfam pentatricopeptide repeat 77 102 IPR002885 -
Mepo4g00742 586 Pfam PPR repeat 302 328 IPR002885 -
Mepo4g00742 586 ProSiteProfiles CBS domain profile. 511 578 IPR000644 -
Mepo4g00742 586 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 73 103 IPR002885 -
Mepo4g00742 586 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 186 220 IPR002885 -
Mepo4g00742 586 Pfam Pentatricopeptide repeat domain 254 291 IPR002885 -
Mepo4g00742 586 Gene3D Tetratricopeptide repeat domain 175 295 IPR011990 GO:0005515
Mepo4g00742 586 Gene3D Tetratricopeptide repeat domain 296 401 IPR011990 GO:0005515
Mepo4g00742 586 PANTHER OS09G0431600 PROTEIN 27 584 IPR044781 -
Mepo4g00742 586 Gene3D Tetratricopeptide repeat domain 17 174 IPR011990 GO:0005515
Mepo4g00742 586 Pfam PPR repeat family 73 121 IPR002885 -
Mepo4g00742 586 Pfam PPR repeat family 187 232 IPR002885 -
Mepo4g00742 586 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 109 139 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00742 Mepo-Chr4 9877954 9884185 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00742 69 367 Miscellaneous Gene Families AT4G11690 24.013 2.66e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00742 - - gmx:100813146 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00742 4 9877954 9884185 Mepo4g00742 4 9877954 9884185 ECH