Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00710 ATGAGCAGAACAACGACTCGGGGTAAAAATAAAAGACCGAGACAAGGGGATGATGAGTCCGGAACTTCAGAAATATTGAGGAAAATATACAAAACAGGCGTAGCAACTGATGATGATATGAACAAACTGTATATGATTACGAAGCCAGTCTGTTCAGGTTGTCGTGTTAATACTAAAGACAATCCGAATTGCTTCTGTGCATTGGTTCCGCCTCCAAGCGGAACGCGGAAGTCTGGCATATGGCAGAAGATATCTGATTTTGTTGATAGTCTTGGCTTTGACCCAAACACGGAACTTCGTGAATCTGCTAATTCACCCGCAGGACTCACAAATCTTGGAGCAACGTGTTATGCTAACAGCATACTCCAATGCTTGTATATGAATAAACGTTTTCGAGAAGGATTATTTTCTGTAGAACCAGATATTTTTCAGCAACAACCAGTGTTAGATCAACTAGCTCGGCTTTTTGCTCAGTTGCATTTAAGTAAAAAGGCTTTCATAGATTCTTCTCCATTTGTAAAAACGCTGGAGTTGGACAATGAAGTTCAGCAAGATAGCCACGAGTTCCTGACATTGCTTCTATCATTGCTTGAGCGTTGCCTTAGCCGTTCCAAAATTTCCAAGGCAAGAACGATAGTTCAAGATCTTTTCCGGGGAAGTGTGTCTCATGTGACAACGTGCTCACAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAATGGAAGACTTCTATGAGTTGGAGTTGAATGTCAAGGGATTGAAAAGTTTAGATGAGAGCTTAGATGATTACCTCACTGTTGAAGAGCTTAATGGAGACAATCAATATTTTTGTGAGTCGTGTAAAACAAGGGTTGATGCTACTCGCAGCATCAAGCTGCGAACGTTACCTGATGTGCTTAATTTTCAGCTTAAGCGCTATGTCTTCCTTCCGAAGACAACAACAAAGAAGAAAGTTACTTCTCCATTTTCATTTCCCGCTGAACTTAGTATGCACCACAGATTGTCTGAGCCATCTCAGTCTGAATTGATATATGACTTGTCAGCTGTTCTGATACACAAGGGAACTGCAGCTAATAGTGGCCATTACATTGCACACATCAAGGATGTGAACACGGGGCAATGGTGGGAATTTGATGATGAGCTTGTTACTAACTTGGGCCGTTGTCCATTTGCCGAAGAAGCTTCATGCTCTGCTTCCAAATCTGTTAAGAATGATGTGGATCATTCTAATTTCTCTGAAGCAAGGGTAGCTGACAGTAATGGAAGTGGTTCAAATGTAAAAGTTTCACAATCTTTACCCATGGAGACATTTTCATCTAGTGATGCATATATGTTGATGTACCATCTTAAGCATACCAATTTTTTTAGTGAGAACGGGGGAATGGAAACTAGTGCTAATCATACTGAAACAGTTGATGTTCCAATTACTGCACAAGATAATGATTGTCTTCCTTCTCATTTTTGTGAAGAGATTCAAAATTTCAATGCCTCATATCTTGGTACTTGCCAGCAATACAACCATAGGAAAGAGGTAGAATTGAGTCGTATCAATGAGAGAAGAGAAGAAGTTCGATCTGTTTTAGCTGAAGCTCCTGTTCAACCACTGGAGCAACCGTATTTTTGGATTTATAGTGACTGGCTTCGCCAGTGGGCCGAAAATGTTACTCCAAGTGCTATTGACAACACATCTATCCAATGTTCACACGGTAAAGTCCCAGTGTCAAAGGTTACCTCGACAAAGCGATTGTCTTCTAAAGCATGGGATAAGTTACTGTCTAAGTATGGTGGAGGGCCAACACTTTCTCACGAGGACTGCTGTTTGGACTGTCTGATTGATGGGGCTCGGAATGTCGTGTCAGCAGACACTTATCGGGATCAAAGAGAATCATTTAAGCAACTTGCACGGGATATTCTTGATGGAAAAAACGAAGATGGAAAGTACTACGTGTCTAGATCATGGTTGCAGCAGTGGTGGAAAAGAAAAGTTGCCGATGCTCCATCTGAAGCTGATTCTGGACCAACAGCAGCTATTAGTTGTCCACATGGACAACTTATGCCTGAGCAAGCAACTGGTGCTAAGCGAGTGCTTGTTCCTGAGGGTTTTTGGCTCTTCTTATACGAAGATGCCACTTCTGTGAAAAATGACGATCTTCTGGTCTGCCCTACGTTTCCTTTAGACTCCAAAGAGTGCTCTGAATGCAGTAGCGAATTATCTGAAGTTTTTTGCATGGAGGACTCTATGAGGTTATTAAAACAAAGGCAGCGTCAGAGTCATGAGAAGCTGTTCAATGGGAAAAGTATGCCCCTCTCTCTAAATTGCTCATATTTCTTAGTTCCTTCCTCTTGGATTTCAAAATGGAGAACTTTTATCAACCCAGCTGTCAAGAATTCTGACACACCTGAAACATTAAATGTGGTGATTGGTGCACTGCTCTGTGAAAAGCACTCACGACTCATTGAAAGGCCTCCTGAACTGATTCTCAGACGTGGTGCTATAATTCCAAGGGAGTCATCTGCAGGTGGCTTAACCATCATATCTGAGAATGATTGGAAATGTTTCTGCGAAGAATGGGGCGCTACTGAAACCCAAGCAGTATCTGCAAAGATTGAAAAAATTAATGATTCGGTGAATGCTACAGCTGCATCTTGTGAAGAGATGGCAATATGTGAGGACCAGTTGGCCAACTGGGATAAGGTGAATAATGAAAGTGGGAATGGTCAATTTTTGATCAAGACTTGTCCCGAGGTTTGTGAAAGTTGCATTGGAGAAAAAGAAAGCTGTGAGTTAGTGCATAAACTTAATTATTCCAATGAGGATATATGTGTAATTCTTGTACGCGGAAAGGAGGTCCCTAGATCAATCTTGGAGGCTTCAAAGGGATTTGTTGAAACAGATCGAAGGGTTTCTAAACGCTCCAGGAAGATTAAAAATGGGAGTTCAATTAATCTAAAAGTGTCTTCTTCAACATCAATTTACCAGCTGAAAATGATGATATGGGAATCCTTTGGGGTTGTCAAAGAAAACCAGATACTACAAAAAGGTGATATAACAATCGATCACATTGACGAAAATACTACACTTGTGGATGTTAATATATTTGCTGGAGATCAGATTATTGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGATGAGCTGTGTAACGAGAAAAAGGATACACAGCGTACTGAGGGAGGGTTTCGTGGAACACTTTTGACTTCAAATGTTTCATCTCAGGTTGTGTAG 3252 0.4114 MSRTTTRGKNKRPRQGDDESGTSEILRKIYKTGVATDDDMNKLYMITKPVCSGCRVNTKDNPNCFCALVPPPSGTRKSGIWQKISDFVDSLGFDPNTELRESANSPAGLTNLGATCYANSILQCLYMNKRFREGLFSVEPDIFQQQPVLDQLARLFAQLHLSKKAFIDSSPFVKTLELDNEVQQDSHEFLTLLLSLLERCLSRSKISKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLTVEELNGDNQYFCESCKTRVDATRSIKLRTLPDVLNFQLKRYVFLPKTTTKKKVTSPFSFPAELSMHHRLSEPSQSELIYDLSAVLIHKGTAANSGHYIAHIKDVNTGQWWEFDDELVTNLGRCPFAEEASCSASKSVKNDVDHSNFSEARVADSNGSGSNVKVSQSLPMETFSSSDAYMLMYHLKHTNFFSENGGMETSANHTETVDVPITAQDNDCLPSHFCEEIQNFNASYLGTCQQYNHRKEVELSRINERREEVRSVLAEAPVQPLEQPYFWIYSDWLRQWAENVTPSAIDNTSIQCSHGKVPVSKVTSTKRLSSKAWDKLLSKYGGGPTLSHEDCCLDCLIDGARNVVSADTYRDQRESFKQLARDILDGKNEDGKYYVSRSWLQQWWKRKVADAPSEADSGPTAAISCPHGQLMPEQATGAKRVLVPEGFWLFLYEDATSVKNDDLLVCPTFPLDSKECSECSSELSEVFCMEDSMRLLKQRQRQSHEKLFNGKSMPLSLNCSYFLVPSSWISKWRTFINPAVKNSDTPETLNVVIGALLCEKHSRLIERPPELILRRGAIIPRESSAGGLTIISENDWKCFCEEWGATETQAVSAKIEKINDSVNATAASCEEMAICEDQLANWDKVNNESGNGQFLIKTCPEVCESCIGEKESCELVHKLNYSNEDICVILVRGKEVPRSILEASKGFVETDRRVSKRSRKIKNGSSINLKVSSSTSIYQLKMMIWESFGVVKENQILQKGDITIDHIDENTTLVDVNIFAGDQIIVRDSEIHENRDIADELCNEKKDTQRTEGGFRGTLLTSNVSSQVV 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00710 1083 ProSiteProfiles DUSP domain profile. 749 869 IPR006615 GO:0004843
Mepo4g00710 1083 Pfam Ubiquitin carboxyl-terminal hydrolase 108 447 IPR001394 GO:0004843|GO:0016579
Mepo4g00710 1083 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 344 362 IPR018200 GO:0004843|GO:0006511
Mepo4g00710 1083 FunFam ubiquitin carboxyl-terminal hydrolase 48 94 450 - -
Mepo4g00710 1083 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 108 123 IPR018200 GO:0004843|GO:0006511
Mepo4g00710 1083 Gene3D - 744 869 IPR035927 -
Mepo4g00710 1083 SUPERFAMILY DUSP-like 518 605 IPR035927 -
Mepo4g00710 1083 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 76 448 - -
Mepo4g00710 1083 SUPERFAMILY Ubiquitin-like 974 1042 IPR029071 -
Mepo4g00710 1083 CDD Peptidase_C19L 108 447 IPR033841 GO:0004843
Mepo4g00710 1083 Gene3D - 973 1043 - -
Mepo4g00710 1083 Gene3D Cysteine proteinases 93 450 - -
Mepo4g00710 1083 SMART dusp 532 608 IPR006615 GO:0004843
Mepo4g00710 1083 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 450 IPR028889 -
Mepo4g00710 1083 ProSiteProfiles DUSP domain profile. 621 723 IPR006615 GO:0004843
Mepo4g00710 1083 MobiDBLite consensus disorder prediction 1 23 - -
Mepo4g00710 1083 FunFam Ubiquitin carboxyl-terminal hydrolase 26 505 603 - -
Mepo4g00710 1083 SUPERFAMILY Cysteine proteinases 104 450 IPR038765 -
Mepo4g00710 1083 CDD Ubl_USP48 966 1076 IPR044743 GO:0004197|GO:0004843|GO:0016579
Mepo4g00710 1083 ProSiteProfiles DUSP domain profile. 514 606 IPR006615 GO:0004843
Mepo4g00710 1083 Gene3D - 505 605 IPR035927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00710 Mepo-Chr4 9544609 9555113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00710 86 379 Miscellaneous Gene Families AT4G31670 29.167 5.23e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00710 - - tpra:123898934 1852.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00710 4 9544609 9555113 Mepo3g05961 3 73834012 73849647 PCT