Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00673 ATGCATTCACAAATTCCCCATCGTATCCTTCGTTCAATTCTCTCTTCAACACTCAAACCGATCCATCTACGCCCATTCTCTTCATGGCTATCCCAACCCGGAAACCCACTCATCAACTGGCCATCCCTCCCATCCAAACCCACTCCAACCCCAACCCTAAACCCAAACCCGAATCCAAAACCCGAATCCCCCACACCCACTTTCTCCTCAAACGATTTCACCCTCATTTCATCTCTCTTCACCAACCCATCCATCTCACCCGGTTCATCTCTCCACACTAACCTAACCCAAACCGGAATCATACCTACTCCCCCTCTCCTCCGAGCTGTTTTCGACCATTTCGCTTCGTCGCCGAAGCTACTCCATTCGCTTTATCTATGGGCCCATAATCAACCCGGGTTTAAACCTGATTCGAGTTTGTTTGATTCCGTAATCAACGCTCTTGCGAAAATGAAGGAGTTTGATGATGCTTGGAGTCTTGTTCTTGATCGTATTGATAGAGATCATGATGATGATGAGAAGTTGGTTTCTGTTGGGACTTTTGCTGTCATCATTCGACGATATGCTAGAGCAGGTATGCACAAGGCTGCTATTAGGACGTTTGAGTTTGCAAAAGATAAGAAGTCAATTGTGGATTCCGTGTCAGAAATGAGTTTATTTGAGATATTAATTGATTCACTCTGCAAAGAAGGGTCTGCAAGGGAAGCTTCAGAATACTTGCTTAGGAGAAAGGAGACAGACCTGGGTTGGGTTCCTTCGATTCGTGTTTATAACATAATGTTAAATGGATGGTTTCGAGCAAGGAAACTCAAACACGCTGAGAGACTTTGGGAAGAGATGAAGAACGAGAATGTGAGACCAAGTGTTGTGACATATGGTACCCTTGTAGAAGGATACTGTCGGATGCGCCGTGTTGAAAAGGCGCTTGAGATGGTTGGTGAAATGACCAAAGAGGGAATTAAACCAAATGCAATTGTATATAACCCCATCATTGATGCATTGGCGGAAGCTGGGAGATTTAAAGAGGCTTTGGGTATGATGGAGCGTTTTCATGTTTTGCAAATAGGTCCTACTCTTTCAACTTACAATTCTCTCGTGAAGGGTTTTTGTAAGGCAGGAGATATTGAAGGTGCTAGTAAAATTCTTAAAAAGATGATAAGTAGAGGTTTCCTTCCAATCCCCACTACCTATAATTACTTTTTTAGGTACTTTTCAAGATGCGGAAAAGTTGATGAAGGGATGAACCTGTATACCAAGATGATTGAATCTGGACATAACCCGGATCGTCTAACTTACCATCTTGTGTTGAAGATGTTATGTGAAGAGGAGAAGTTAGAGTTGGCAGTTCAAGTTAGCAAGGAAATGAGGCATAAAGGATATGACATGGACTTAGCTACAAGTACCATGTTAACTCATTTGCTATGCAAAATGCATAAGTTGGAAGAGGCTTTTGCAGAATTTGAGGACATGATAAGAAGAGGTATAATTCCTCAATATCTTACATTTCAAAAATTGAATGTTGAGTTAAAGAAACAAGGTATGACTGAAATGGCTCGAAAGCTTTGCCACTTGATGTCGTCTGTTCCCCATTCTGACAAATTGCCAAATACATATGGTGAAGTCAGAGATGATGCACATGCTCGTAGGAAATCTATAATTCAGAAAGCCAAAGCAGTTTCTGATTTGCTAAAGGACCCCAAAGAACTTGATAAGTTTAGAAGTTCATCAGAAGATGCTGTCTCAAGTGCAAACTGTTCGATTGAGGATATTGAGAAAAAAGTAGGTATAAGATGA 1794 0.4158 MHSQIPHRILRSILSSTLKPIHLRPFSSWLSQPGNPLINWPSLPSKPTPTPTLNPNPNPKPESPTPTFSSNDFTLISSLFTNPSISPGSSLHTNLTQTGIIPTPPLLRAVFDHFASSPKLLHSLYLWAHNQPGFKPDSSLFDSVINALAKMKEFDDAWSLVLDRIDRDHDDDEKLVSVGTFAVIIRRYARAGMHKAAIRTFEFAKDKKSIVDSVSEMSLFEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSKEMRHKGYDMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRGIIPQYLTFQKLNVELKKQGMTEMARKLCHLMSSVPHSDKLPNTYGEVRDDAHARRKSIIQKAKAVSDLLKDPKELDKFRSSSEDAVSSANCSIEDIEKKVGIR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00673 597 Gene3D Tetratricopeptide repeat domain 109 242 IPR011990 GO:0005515
Mepo4g00673 597 Gene3D Tetratricopeptide repeat domain 315 388 IPR011990 GO:0005515
Mepo4g00673 597 Gene3D Tetratricopeptide repeat domain 243 314 IPR011990 GO:0005515
Mepo4g00673 597 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 288 322 IPR002885 -
Mepo4g00673 597 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 323 357 IPR002885 -
Mepo4g00673 597 MobiDBLite consensus disorder prediction 40 68 - -
Mepo4g00673 597 SUPERFAMILY HCP-like 255 450 - -
Mepo4g00673 597 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 358 392 IPR002885 -
Mepo4g00673 597 Pfam PPR repeat family 396 440 IPR002885 -
Mepo4g00673 597 Pfam PPR repeat family 252 301 IPR002885 -
Mepo4g00673 597 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 428 462 IPR002885 -
Mepo4g00673 597 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 393 427 IPR002885 -
Mepo4g00673 597 NCBIfam pentatricopeptide repeat 256 288 IPR002885 -
Mepo4g00673 597 NCBIfam pentatricopeptide repeat 290 324 IPR002885 -
Mepo4g00673 597 NCBIfam pentatricopeptide repeat 396 428 IPR002885 -
Mepo4g00673 597 NCBIfam pentatricopeptide repeat 361 392 IPR002885 -
Mepo4g00673 597 NCBIfam pentatricopeptide repeat 325 352 IPR002885 -
Mepo4g00673 597 PANTHER ATPASE EXPRESSION PROTEIN 3 404 526 - -
Mepo4g00673 597 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 463 497 IPR002885 -
Mepo4g00673 597 MobiDBLite consensus disorder prediction 40 64 - -
Mepo4g00673 597 Gene3D Tetratricopeptide repeat domain 389 564 IPR011990 GO:0005515
Mepo4g00673 597 Pfam PPR repeat 468 495 IPR002885 -
Mepo4g00673 597 Pfam PPR repeat 222 240 IPR002885 -
Mepo4g00673 597 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 253 287 IPR002885 -
Mepo4g00673 597 Pfam PPR repeat 319 348 IPR002885 -
Mepo4g00673 597 Pfam PPR repeat 357 385 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00673 89 497 Miscellaneous Gene Families AT4G11690 26.374 2.34e-44 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00673 - - gmx:100793484 817.764