Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00629 ATGCCTCAGCATGGTCCTGCCAAAATTTCATGGCCACATGTTTGGGGGCAGTTTTGCTTATGTTATGATGGACAGAAGCTAGTTACAGAGGAGGAGCACCTTAAAAATTATGGCGTCAAGGACGGTGACCAGCTTCATTTCATTCGCCATGCATCAAACAATTGTGGTGCACGAAGAAAGCGGTCCAAGAAAAGAGTTTTCCATTTGAAACAACACAGGAGGTTGTCGCAAGCAAATTACTGCAAACAGAAAGAAAACTGCGATGCTGATGATGATGACGACGCTGATGACATATGTTCTGATAAGGAAGCCTTAGAGAATGCAGAGACCAAGCACCACATTGAAGAAGTACATGTTAGAAAGAACAAGATCACTGGCTTTGTGGGAGAGCTGTTATCATACACACCACTGGCAGTTGTGAGAAAAACTAGAGCTCAAAACCGGATCTTCCCGTCAACAATTTCCAGGTGTTTTATTGGTGGCCTTAGAAAGATCAAAAGGATTGTATGTTTTGGTAGGAGGCAGCAGTATCCTACATGGAGACAGTACTAA 552 0.433 MPQHGPAKISWPHVWGQFCLCYDGQKLVTEEEHLKNYGVKDGDQLHFIRHASNNCGARRKRSKKRVFHLKQHRRLSQANYCKQKENCDADDDDDADDICSDKEALENAETKHHIEEVHVRKNKITGFVGELLSYTPLAVVRKTRAQNRIFPSTISRCFIGGLRKIKRIVCFGRRQQYPTWRQY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00629 183 Pfam Ubiquitin-like domain 4 50 IPR040610 -
Mepo4g00629 183 SUPERFAMILY Ubiquitin-like 3 56 IPR029071 -
Mepo4g00629 183 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 1 169 IPR039690 GO:0000398|GO:0005689
Mepo4g00629 183 Gene3D - 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00629 Mepo-Chr4 8594743 8598745 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00629 - - gmx:100820296 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00629 4 8594743 8598745 Mepo4g00629 4 8594743 8598745 ECH
Mepo3g07422 3 87611579 87612481 Mepo4g00629 4 8594743 8598745 ECH
Mepo4g00629 4 8594743 8598745 Mepo3g07422 3 87611579 87612481 PCT