Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00618 ATGTATAACTTCAACGAGGAGGTTCTGCTGTTCTTCCTGTTACACTGTTTTGCAGAAGAAGGTTTAAAGGAAACAGCACACACGTTTGAGCGTGAAAGTGGGTTGTACTTTGACTTTAAGTATTTTGAGGAGATGGTACTTACAGGCCAATGGGATGAAGTTGAGAAGTATCTTTCTGGATTTACAAAAGTTGAAGACAATAATCATTCACTTAAAATATACTTTGAATTGAGAAAGCAAAGATACTACGAGGCTTTGGACAGCAACAATCGTGACAAGGCTATAGAAATCCTTACTAAGGATCTAAAAGTCTTCCGTTCAAGAAATGAGGAAGTATTTAAAGAATTGACTCTATTATTGACATTCAACAATATAAGGGAACATGAATTACTTTCAACATATCAAGATGCAATTTCTTCAAGAAAGATTGTGATGGATGAAATTAAGGAAATCATAGAGAAACATCCTATGCTGAAAGGAAAATTGAAATTTCCTGATATTGATTGTCAAAGGCTAAAGCATCTTCTAAATGCAAGCTTAAATTGGCAGCACCAAAATAATGCTCCAGCTTCTCCAGAACATGGCCTCTTTATGAATCATGTCAATCAGTTCATACCATCTACTTCTGCTGCAATAAATCAAGGAACAGCTTTGAATAATCTTGCGGTACCTAATGAGAGTGGTAAAAATTTGGAGGACCTGAGACCTGATTCAATTGAAAAATCCCACAAATTATCAGAAAGTGTATTTCAGATTTGTACACCATCTCAATGCCATATGTTGCTACTTCCTAAACAGCCAGAAGAAAACAAGATTGTTAGACTCGCTTACACAAATTCGGGAAATGGCATTTTGGCATTGACATCAAATGGTAATCATCTACTTTGGTTATGGACACATACTAGTATTAATATGGGAGCCAAGGCAACAACACAAGTTCATCCTCAATTGGCAAAAAATGGTTTGGAATTCATGAGCAATGACCTTACAAATGCCAATGGTGAAGATTTAGTTTCCTGTTTTGCTATATCAAAAGCAGATTCTTATCTCCTATCAACCTCAGGAGGGTTGGTTTCTTTGTTCAATATGGTATCATTTAAGACTCTAGTAACTTTCATGCCACCTCCACCAATGGTAACAAGTCTTGCCTTCTATCCTAAAGATAATAATACTTTTCTTATTGGCTTGGATGACTCCAGCATACGTGTATACAATATTCACATGCATGATGAGGTTCAAAAGCTTGAGGGTCATTCTAAACGAGTTTCTGCTCTTGCCTTCTCAAATACTTTGAATATACTTGTTTCTGCTGATGCAAGCCCTCAGATTATTGTATGGAATAGCAGTAGCTGGGAAAAATTGAGAGATAGAAACTTGCAAATAGATGGACCCAATGTGCCACAAATGTTTTCTGAAACTCACATTCAATTTCACCCTGATAAGCAAAAATTTCTTTTTGTACATAAAATTCATCTAGCAATTTATGAAGCAACAGAACTAAAATGTGTCAACCAGTGGGATCCAAATTTTCCAACAGTTATCTGCCAAGCAATATTCTCATCTAATGGTCAAATGGTGTATGCTTGTTTTCTTGATGGGAATTTGGCAATATTTGATGCATCAAATTTTCAAATGCATTATAACATTCAGCCCTCTGTTTACCACCCTTCATCAATTCCCAGTGAGAAAATCTACCCAACTGTTTTAGCTGCTCATCCACAGAAACCAAACCAATTTGCTGTAGGGTTAACCGATGGTTGTGTTTATGTGTTTGAGCCAAAGGAACCATGTGGTAATTGGATCATATCTCAAGTTGATAAAGAAAAAGCTAACAGCATAGGGAGTCAAGGTTGA 1854 0.363 MYNFNEEVLLFFLLHCFAEEGLKETAHTFERESGLYFDFKYFEEMVLTGQWDEVEKYLSGFTKVEDNNHSLKIYFELRKQRYYEALDSNNRDKAIEILTKDLKVFRSRNEEVFKELTLLLTFNNIREHELLSTYQDAISSRKIVMDEIKEIIEKHPMLKGKLKFPDIDCQRLKHLLNASLNWQHQNNAPASPEHGLFMNHVNQFIPSTSAAINQGTALNNLAVPNESGKNLEDLRPDSIEKSHKLSESVFQICTPSQCHMLLLPKQPEENKIVRLAYTNSGNGILALTSNGNHLLWLWTHTSINMGAKATTQVHPQLAKNGLEFMSNDLTNANGEDLVSCFAISKADSYLLSTSGGLVSLFNMVSFKTLVTFMPPPPMVTSLAFYPKDNNTFLIGLDDSSIRVYNIHMHDEVQKLEGHSKRVSALAFSNTLNILVSADASPQIIVWNSSSWEKLRDRNLQIDGPNVPQMFSETHIQFHPDKQKFLFVHKIHLAIYEATELKCVNQWDPNFPTVICQAIFSSNGQMVYACFLDGNLAIFDASNFQMHYNIQPSVYHPSSIPSEKIYPTVLAAHPQKPNQFAVGLTDGCVYVFEPKEPCGNWIISQVDKEKANSIGSQG 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00618 617 ProSiteProfiles Trp-Asp (WD) repeats profile. 415 456 IPR001680 GO:0005515
Mepo4g00618 617 ProSiteProfiles LIS1 homology (LisH) motif profile. 5 37 IPR006594 GO:0005515
Mepo4g00618 617 SMART WD40_4 365 405 IPR001680 GO:0005515
Mepo4g00618 617 SMART WD40_4 499 539 IPR001680 GO:0005515
Mepo4g00618 617 SMART WD40_4 325 362 IPR001680 GO:0005515
Mepo4g00618 617 SMART WD40_4 408 447 IPR001680 GO:0005515
Mepo4g00618 617 SMART WD40_4 558 592 IPR001680 GO:0005515
Mepo4g00618 617 SUPERFAMILY WD40 repeat-like 330 594 IPR036322 GO:0005515
Mepo4g00618 617 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 36 93 IPR006595 -
Mepo4g00618 617 SMART ctlh 35 93 IPR006595 -
Mepo4g00618 617 Gene3D - 471 603 IPR015943 GO:0005515
Mepo4g00618 617 Gene3D - 241 463 IPR015943 GO:0005515
Mepo4g00618 617 Pfam WD domain, G-beta repeat 412 447 IPR001680 GO:0005515
Mepo4g00618 617 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 227 608 IPR027728 GO:0006355
Mepo4g00618 617 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 415 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00618 Mepo-Chr4 8447437 8454000 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00618 - - mtr:112416070 1189.87