Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00577 ATGGCCGTCCAAAAAATCATAATAACACCAATTTTGGTTTTTCTAGTGACCATTTTCTTCAATGTATCATCATCATCATCTTCTAATAATTCGCAATACCAATTTTTAAACCATGGTGTTAGATCAGCATATTGGCCAGCAGGTGATGATTTTTCACCCTCTTTGATTGACACAAACTACTTCACACACATTTTCTTGGCCTTCATTCAACCAGAACCAATCTCCTTCAAACTTGAAATCACAAAATCCGGCAAAAAATGGGGCCAGAATTTCATCAAGGCACTCAGCCACCGTTCCCCGCCAGTTAAAACACTTTTATCAATTGGAGGTGGTGGTAGCAATTCAACACTCTTCTCTGAAATTGCTAGCACAAAACAAAATAGAGAAATTTTTATAAATTCAACAATCGACGTGGCAAGAAAATATAGGTTTGATGGTGTTGACTTGGATTGGGAATTTCCTGAAACTCAACAAGACATGTTTAACCTTGGTTTGTTGTATGAGGAATGGTATAATGCTTTGTTTGCTGAAGCTAAGGTTAGGAGAAAACCACGTTTGCTTTTGACTTCAGCTGTTTACTACAATTCCACTGTTAGGCTTATTGGTAAACATGGGCCGAGATCGTACCCGGCCCAAGCTATCAATAAATACTTGGACTGGGCCAGTCCAATGTGTTTTGATTATCACGGTACATGGGATAATAATACCGGCTTTAATGCTGCTTTGTATGACTCGAAGTCCGAAATTAGTACCAATTTTGGACTCCACTCATGGATCAAATCAGGTGTTCGACCTGAAAAGTTGGTTATGGGTTTGGCTTTATATGGACGGGCGTGGGAGCTGAAGAATCCAAATGTCAACGGAGTGGGAGCGGAGGCGGTGGGGCCTGCAACTGACACGGATGGTAGTATGAATTATAATGATATTTTGAAATTTAACCAACAGAGTGGTGCTAATGTTGTGTATGATAAGGTTGCTGTATCTTTTTATTCTTATGCGGGTACTACTTGGATCGGGTATGATGACGGGCCTTCAATAAAGACTAAGGTTCGGTTCGCTAAGTCCTTGGGCTTGAAAGGCTATTTCTTTTGGGCCCTTGGGAAGGATAAGGATTGGACCATCTCAAAACAAGCTTCAAATGCATGGGGACACTGA 1155 0.4069 MAVQKIIITPILVFLVTIFFNVSSSSSSNNSQYQFLNHGVRSAYWPAGDDFSPSLIDTNYFTHIFLAFIQPEPISFKLEITKSGKKWGQNFIKALSHRSPPVKTLLSIGGGGSNSTLFSEIASTKQNREIFINSTIDVARKYRFDGVDLDWEFPETQQDMFNLGLLYEEWYNALFAEAKVRRKPRLLLTSAVYYNSTVRLIGKHGPRSYPAQAINKYLDWASPMCFDYHGTWDNNTGFNAALYDSKSEISTNFGLHSWIKSGVRPEKLVMGLALYGRAWELKNPNVNGVGAEAVGPATDTDGSMNYNDILKFNQQSGANVVYDKVAVSFYSYAGTTWIGYDDGPSIKTKVRFAKSLGLKGYFFWALGKDKDWTISKQASNAWGH 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00577 384 SMART 2g34 39 369 IPR011583 GO:0008061
Mepo4g00577 384 Pfam Glycosyl hydrolases family 18 44 369 IPR001223 GO:0005975
Mepo4g00577 384 CDD GH18_plant_chitinase_class_V 40 375 - -
Mepo4g00577 384 Gene3D - 274 340 IPR029070 -
Mepo4g00577 384 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 144 152 IPR001579 GO:0004553|GO:0005975
Mepo4g00577 384 Gene3D Glycosidases 55 370 - -
Mepo4g00577 384 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 39 384 IPR001223 GO:0005975
Mepo4g00577 384 SUPERFAMILY Chitinase insertion domain 275 340 IPR029070 -
Mepo4g00577 384 PANTHER CHITINASE 39 382 - -
Mepo4g00577 384 FunFam Class V chitinase CHIT5b 274 340 - -
Mepo4g00577 384 SUPERFAMILY (Trans)glycosidases 43 371 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00577 Mepo-Chr4 8053626 8056062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00577 40 382 Glycoside Hydrolase AT4G19810 41.739 1.50e-87 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00577 K01183 - gmx:100787511 537.339