Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo4g00479 | ATGGCTTCAGCTTCTGTTTCAATGTCTTTACCACTAACCCAAGCTACCCACAAAAACCTTCACAATCCTTCCACCACACCCTTCTTGAAACCATTGCCCTTTCCACAAGCAAAGAAGACACTAGTCAACAAGTCAACTTCAAAATCCAATGTTGTTGGAATTCAAGCATCATTGAAAGACAAAACAGTGAAGGGTCTAACAGCTTTTGCATTAACAGCCTCTATGGTGTTACCAGATGTTGCTAATGCAGCTGGAAATGATTTTTCACCATCTCTTAAAAACTTTTTGCTTAGCATTGCTGCTGGTGGTGTTGTTCTTACAGCTATATTGGGTGCTGTTGTTGGTGTTTCCAACTTTGATCCTGTTAAGAGAACTTAA | 378 | 0.3995 | MASASVSMSLPLTQATHKNLHNPSTTPFLKPLPFPQAKKTLVNKSTSKSNVVGIQASLKDKTVKGLTAFALTASMVLPDVANAAGNDFSPSLKNFLLSIAAGGVVLTAILGAVVGVSNFDPVKRT | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo4g00479 | 125 | Gene3D | Single helix bin | 88 | 125 | - | - | |
| Mepo4g00479 | 125 | FunFam | Photosystem II psbX protein | 87 | 125 | - | - | |
| Mepo4g00479 | 125 | PANTHER | OS07G0673550 PROTEIN | 1 | 125 | - | - | |
| Mepo4g00479 | 125 | Pfam | Photosystem II reaction centre X protein (PsbX) | 89 | 124 | IPR009518 | GO:0009523|GO:0015979|GO:0016020 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo4g00479 | Mepo-Chr4 | 6768468 | 6769163 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo4g00479 | - | - | tpra:123916525 | 221.09 |