Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00478 ATGGGAGGTGTATTCTCAACAAATAAAACCATGGGAGAGGCACCAGAAATGTTTTACGTTAACGAGTTCGCAAAGGTTGTCCCTGAAGTTCAATCAAACCATGTCAACAACGTTGATGATTCTTCCACATGGTACGAGGAAATCATCGATGATGATCTCAAATGGTCCTTTAAACTCAACAGTGTGCTTCATAAAGCGATTAGTGAATACCAGGACATTGCTCTCTTGGATACAAAGCGTTTTGGAAAGGCGTTGATGCTTGATGGAAAGATGCAGAGTTCTGAAGCAGATGAATTCATTTATCATGAATGCTTGATTCATCCCTCTCTTTTGTGTCATCCAAACCCCAAGACAGTGTTTATAATGGGAGGTGGTGAAGGTTCAGCAGCTAGGGAAGCTCTCAAGCACAAGTCAATGGACAAAGTTGTTATGTGCGATATTGACAAGGAGGTGGTGGATTTCTGCAGAAAATACCTGGTTGCAAATAAGGAGGCATTTGCTGACAAGAAGCTCGACCTTGTCATCAACTGTGCCAAGGCTGAATTAGAGAAAAGAAAGGAGAAGTTTGATATCATTGTTGGAGATTTGGCTGACCCGCTTGAAGATGGTCCTTGCTATCAGCTCTACACTAAGTCCTTCTATGAGAAAGTTGTGAAGCCTAAACTCACTGAGAATGGCGTTTTTGTGACCCAGGCTGGACCAGCAGGTATCTTTTCACACAAAGAGGTCTTCACCTCTATACACAACACCATAAAACAGGTCTTCAAATATGTGGTGGCATACTCGACTCATGTACCATCATTTGCTGATTCATGGGGATGGGTTATGGCTTCAGACCAACCAATATTGATTGATGCTGTGGAAATGGACAAAAGAATTGAAGCAAGAATAAAAGGGAAATTGCTCTATCTAGATGGTGCTTGGTTCCATTCATCTACTATCATGAACAAGACCGTGTCCAAATCGCTGAAAAATGAAACTCATGTGTACACTGAAGATAATGCTAGATTTATTCCTGGTCATGGCATAGCATGTCGTCCCTAA 1044 0.4176 MGGVFSTNKTMGEAPEMFYVNEFAKVVPEVQSNHVNNVDDSSTWYEEIIDDDLKWSFKLNSVLHKAISEYQDIALLDTKRFGKALMLDGKMQSSEADEFIYHECLIHPSLLCHPNPKTVFIMGGGEGSAAREALKHKSMDKVVMCDIDKEVVDFCRKYLVANKEAFADKKLDLVINCAKAELEKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKVVKPKLTENGVFVTQAGPAGIFSHKEVFTSIHNTIKQVFKYVVAYSTHVPSFADSWGWVMASDQPILIDAVEMDKRIEARIKGKLLYLDGAWFHSSTIMNKTVSKSLKNETHVYTEDNARFIPGHGIACRP 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00478 347 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 41 334 - -
Mepo4g00478 347 Gene3D Vaccinia Virus protein VP39 95 345 IPR029063 -
Mepo4g00478 347 Pfam Spermidine synthase tetramerisation domain 44 95 IPR035246 -
Mepo4g00478 347 NCBIfam fused MFS/spermidine synthase 115 269 - -
Mepo4g00478 347 FunFam Polyamine aminopropyltransferase 95 342 - -
Mepo4g00478 347 Hamap Polyamine aminopropyltransferase [speE]. 43 324 IPR001045 GO:0003824
Mepo4g00478 347 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 42 279 IPR030374 -
Mepo4g00478 347 Gene3D Spermidine synthase, tetramerisation domain 42 94 IPR037163 -
Mepo4g00478 347 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 42 323 IPR029063 -
Mepo4g00478 347 CDD AdoMet_MTases 123 231 - -
Mepo4g00478 347 Pfam Spermine/spermidine synthase domain 98 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00478 Mepo-Chr4 6763979 6769329 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00478 K18787 - gmx:100784972 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00478 4 6763979 6769329 Mepo4g00478 4 6763979 6769329 ECH