Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00476 ATGATAGCTTACCTTGAACACTTCGTTCATGGAAACGACATTGAATCACCACCAAACGACGACGTTTCATCTCTCCAATCTTCTTTCCATTTCGCCCCAAATTCCATCGCTAGTAAAGACTTCGGTGGCATGAAGTCCTCCACTCCCCTCGCCGTACTCCGCCCTTACACCACCGCCGATGTTGTAAAAGCCGTAAAAGCAGCAGCAACCACCACAAATTTAACAGTGGCGGCGCGTGGTAACGGTCACTCCATCAACGGCCAAGCCATGGCGGAGAATGGACTCGTCCTCGACATGCGAGCCACGGCGGAGGAGCCTTTTCAACTTCTCTACGTCGACGGTGTTCCACACGTCGACGTTTCCGGTGGGGCATTATGGGAAGAAGTGTTGAAACGCTGCGTTTCGAGGTTTCAGCTTGTTCCGAGGTCGTGGACGGATTATCTTGGTTTGACGGTGGGTGGAACGTTATCTAACGCTGGTGTTAGTGGTCAGACTTTCCGTTATGGTCCTCAAACGGCAAACGTAACGGAATTGGAAGTTGTTACTGGTAAAGGTGATAGTTTTGTTTGTAATGAAAATCAAAATTCTGAGCTTTTTTTTGCTTCTCTTGGTGGTCTTGGTCAGTTCGGTGTCATCACTAGAGCCAGAATCGTTCTTCAACAAGCCCCTGATATGGTGAGGTGGATAAGGGTGATTTACTCGGAATTTGAGGACTATACTAAAGATGCAGAGTGGCTGGTGACACTACCCGAAGGTGACGGTTTTGATTACGTGGAAGGGTTCGTTGTGGCTAACAATGATGACCCTTGTAATGGTTGGCCCACAATTCCGATGGGTTCGAACCAAATTTTCAACCCGGTTTGTCTTCCTTCTTCAGCTGGACCGGTTCTCTATTGCTTAGAGCTTGCTCTTCATTATCGTAAAACCGCTCGATCTTCTGAAGTCAATACGAAAGTGGATAGATTGCTTGGAGGGTTGAGATTTGTTGAGGGAATAAAATTTGAGGATGATGTGAAGTACATGGATTTTTTGCTACGTGTAAAGCGTGTGGAAGAGGATGCTAAAGCCAAAGGTATATGGGATGCACCTCACCCATGGTTGAACATGTTTGTGTCCAAGTCCGACATTGCTGATTTTGATCGTGAAGTGTTCAAGAAAATCCTCAAACATGGGGTTGGTGGTCCCATTCTAGTGTACCCACTATTGCGAAGCAAGTGGGATGATAGACACTCGGTAGTGGTGCCAGACAGCAACATTTTCTACATAATAGCATTACTCCGATTTATTCCACCACCACCTAAGGGACCACCTACTGATAAATTGGTGGCACAAAACAATGCAATTATTCAATTGTGCTACAACAAGGGATTTAATTTCAAGTTATATCTTCCACACTACACGTCTCAGGAGAATTGGATGCGACACTTTGGGGATAAGTGGACTAGATTTGTCCAGAGAAAACAAAATTTTGATCCAATGGCTATTCTTGCACCTGGACAAAAAATATTTTCCAGAAACCAACTTAAATAA 1530 0.4523 MIAYLEHFVHGNDIESPPNDDVSSLQSSFHFAPNSIASKDFGGMKSSTPLAVLRPYTTADVVKAVKAAATTTNLTVAARGNGHSINGQAMAENGLVLDMRATAEEPFQLLYVDGVPHVDVSGGALWEEVLKRCVSRFQLVPRSWTDYLGLTVGGTLSNAGVSGQTFRYGPQTANVTELEVVTGKGDSFVCNENQNSELFFASLGGLGQFGVITRARIVLQQAPDMVRWIRVIYSEFEDYTKDAEWLVTLPEGDGFDYVEGFVVANNDDPCNGWPTIPMGSNQIFNPVCLPSSAGPVLYCLELALHYRKTARSSEVNTKVDRLLGGLRFVEGIKFEDDVKYMDFLLRVKRVEEDAKAKGIWDAPHPWLNMFVSKSDIADFDREVFKKILKHGVGGPILVYPLLRSKWDDRHSVVVPDSNIFYIIALLRFIPPPPKGPPTDKLVAQNNAIIQLCYNKGFNFKLYLPHYTSQENWMRHFGDKWTRFVQRKQNFDPMAILAPGQKIFSRNQLK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00476 509 Gene3D - 226 462 IPR016170 -
Mepo4g00476 509 Pfam FAD binding domain 49 190 IPR006094 GO:0050660
Mepo4g00476 509 ProSiteProfiles PCMH-type FAD-binding domain profile. 45 222 IPR016166 GO:0071949
Mepo4g00476 509 SUPERFAMILY FAD-linked oxidases, C-terminal domain 223 503 IPR016164 GO:0003824|GO:0050660
Mepo4g00476 509 Gene3D - 99 224 IPR016169 -
Mepo4g00476 509 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 223 503 IPR015345 GO:0009690|GO:0019139|GO:0050660
Mepo4g00476 509 Gene3D - 37 504 IPR016167 -
Mepo4g00476 509 PANTHER GULONOLACTONE OXIDASE 18 504 - -
Mepo4g00476 509 SUPERFAMILY FAD-binding/transporter-associated domain-like 36 219 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00476 Mepo-Chr4 6693916 6699775 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00476 K00279 - gmx:100783374 823.157