Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00446 ATGGAGAATATTGCAGAGGATGCTCCACCAAACAACATCAATTTTGAACAACCATACAGAACTTGGTACCACTTTCAACCCCAAAAGAATTGGATGAATGATCCTAATGGACCAATGTACTATAAAGGATATTACCATTTCTTCTACCAACATAACCCTGATGGAGCAAGCTTTGGTGTGAATAAAATGGTATGGGGTCATTCTATATCAAAAGATCTCATAAATTGGACTCATTTGAATCATGCTATTGAACCAACTTGTGCTGGTGAAACAAGTTGCTTCTCAGGCTCAGCCACAATAGTTCCAGGAGAAAAACCTGTTATATATATGTTGTATACAGGATTAATTAATGAAAAAACACACCAAGTTCAATACTTAGCTATGCCGAAGGATTTATCAGACCCTAAGCTAATAGAATGGGTAAAACACCCTCAAAATCCTTTGATGGCTGCACCTAATGGAGTTGAAGTAGGTGAATTCAGAGACCCTTCAACTGCATGGCAAGGAAAAGATGGAAAATGGAGAGTACTAATAGGTGCTCGAAATGGCGAACAAGGAAAAGCTATTCTTTACAGAAGTGAGGATTTTGTTAATTGGATTGTAGATCCTAATCCATTCTATGCAACAGAAGGTACCGGTGTTTGTGAATGTCCGGATTTTTTTCCTGTGTATATCAATAGCACAAATGGGGTTGATACATCTGTGGAAAATTCAAGTGTTAGACATGTCTTTAAGATAAGTTATTTACTAAGACGACATGATTACTACTTCATTGGGAAATATGTATCTGATTCTGATCAGGAAAATTTTATTCTTGATGAAAAATTTACTGGAACTTGGAAGGAATTGAGATTTGACTATGGTAATTTTTATGCCTCAAAGTCATTTTTTGACTATGCTAAGAACAGGAGAATATTATGGGCATGGGTATTAGAGTCTGACACCAGAGAAGATGGCATTGAAAGAGGATGGGCTGGTCTACAGACAATTCCAAGGAAGTTTTGGCTTGATGAAAGCGGGAAGCGATTACTGCAGTGGCCAGTCGAAGAGTTAGAACAACTACGTTACAACCAAATCAATATCACTGGAGAGACACTCCTAAGTGGATCAACTCTTGAAGTAATAGGTATCACTGCATCTCAGGCTGATGTGGAAGTCTTGTTTGAGCTACCTGATCTACAAAGTGCTGAGGTGCTAGAACCAAGTGAAGTTGATCCTCAAGAACTCTGTAAAGAACAATATGCATCAAGAAAAGGTATGATAGGGCCATTTGGTTTGCAAGCTTTAGCATCAATAGACCAGACAGAGAGGACTACAATATCTTTCCGAATATATAGAGTTGGCGATGAATATAAATGCTTGATGATAAGTGACCAGACCAGATCTTCGTCTTCAATGAGGAAGGGCCTTGAAAAACCAATATATGCAACTATATTTGACATTGATCCCAATATCAAAACGATTTCACTAAGAAGCTTGATTGACCGGTCCATTATAGAGAGTTTTGGAGATGGAGGGAAAGTTGTGATAACAAGTAGAGTGTATCCCTTGTTGGCTATAGAGAAAGATGCACATCTTTTTGCATTCAATGATGGAAGTCAGAGTGTGGTTATCTCAAAGCTTGATGCTTGGAGCATGAGGCAAGCAGAGTTTGAGAATGAACAAGCATAA 1671 0.3824 MENIAEDAPPNNINFEQPYRTWYHFQPQKNWMNDPNGPMYYKGYYHFFYQHNPDGASFGVNKMVWGHSISKDLINWTHLNHAIEPTCAGETSCFSGSATIVPGEKPVIYMLYTGLINEKTHQVQYLAMPKDLSDPKLIEWVKHPQNPLMAAPNGVEVGEFRDPSTAWQGKDGKWRVLIGARNGEQGKAILYRSEDFVNWIVDPNPFYATEGTGVCECPDFFPVYINSTNGVDTSVENSSVRHVFKISYLLRRHDYYFIGKYVSDSDQENFILDEKFTGTWKELRFDYGNFYASKSFFDYAKNRRILWAWVLESDTREDGIERGWAGLQTIPRKFWLDESGKRLLQWPVEELEQLRYNQINITGETLLSGSTLEVIGITASQADVEVLFELPDLQSAEVLEPSEVDPQELCKEQYASRKGMIGPFGLQALASIDQTERTTISFRIYRVGDEYKCLMISDQTRSSSSMRKGLEKPIYATIFDIDPNIKTISLRSLIDRSIIESFGDGGKVVITSRVYPLLAIEKDAHLFAFNDGSQSVVISKLDAWSMRQAEFENEQA 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00446 556 Gene3D - 360 546 - -
Mepo4g00446 556 Gene3D Glycosyl hydrolase domain; family 43 28 359 IPR023296 -
Mepo4g00446 556 SMART glyco_32 24 506 IPR001362 GO:0004553|GO:0005975
Mepo4g00446 556 Pfam Glycosyl hydrolases family 32 C terminal 350 545 IPR013189 -
Mepo4g00446 556 Pfam Glycosyl hydrolases family 32 N-terminal domain 24 347 IPR013148 -
Mepo4g00446 556 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 13 550 - -
Mepo4g00446 556 ProSitePatterns Glycosyl hydrolases family 32 active site. 24 37 IPR018053 GO:0004553|GO:0005975
Mepo4g00446 556 CDD GH32_Fruct1-like 30 336 - -
Mepo4g00446 556 SUPERFAMILY Concanavalin A-like lectins/glucanases 347 548 IPR013320 -
Mepo4g00446 556 SUPERFAMILY Arabinanase/levansucrase/invertase 15 348 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00446 Mepo-Chr4 6362179 6364900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00446 5 549 Glycoside Hydrolase AT3G13784 51.532 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00446 - K01193 gmx:100806220 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00446 4 6362179 6364900 Mepo4g00446 4 6362179 6364900 ECH