Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00423 ATGGAACGTGCAAGAAGACTCGCAAACCGTGCAACTCTGAAACGTCTTCTTTCAGAGGCAAAACAAAATTGTAAGAACGAATCAACAACAACAACAGCACCTCTTCCATTTTCATCTTCAACAAGATATGTTTCCTCTGTTTCAAACTCTGTTTTCAGAAACAGAGGATCCAACGTTTTTGGAAGAAACAGCAATGTTTCACGTGGTGTTGGTGGATTTCACGGTTCTGGGTCTTCAACACAATCTCGATCCATCACCGTTGAAGCTTTGAAACCAAGTGATACATTCGCAAGACGCCATAACTCAGCTACACCAGAAGAACAAACAAAAATGGCTGAATCATGTGGTTTTGATCATCTTGATTCACTTGTTGATGCAACAGTTCCCAAATCAATCCGTTTGAAGGAAATGAAGTTTAACAAGTTTGATGCAGGGTTAACAGAAGGTCAAATGATTGAACACATGAAAGATTTAGCTTCAAAGAATAAGGTTTTCAAATCTTTCATTGGTATGGGATACTATAACACACATGTTCCACCAGTGATCTTGAGGAATATTTTGGAGAATCCAGCTTGGTATACTCAGTATACACCTTACCAAGCTGAGATTTCGCAGGGTCGTCTCGAATCGTTGTTGAATTTTCAAACCTTGATTACTGATCTCACTGGTTTGCCTATGTCAAATGCTTCATTGCTTGATGAAGGTACTGCTGCAGCTGAAGCAATGTCTATGTGTAATAATATTCAAAAGGGTAAGAAGAAGACTTTTATTATTGCTAGTAATTGTCATCCACAAACTATTGATATATGTAAGACAAGAGCTGATGGATTTGAGCTTAAGGTTGTGGTGAAAGATCTTAAGGATATTGATTACAAATCTGGTGATGTTTGTGGTGTTCTTGTTCAGTATCCTGGTACTGAAGGTGAGGTTTTGGATTATGGTGAGTTTATTAAGAAGGCTCATGCTAATGAGGTTAAGGTTGTTATGGCAAGTGATCTATTGGCATTGACTGTGTTGAAGCCTCCTGGTGAGTTTGGAGCTGATATTGTTGTTGGTTCGGCTCAGAGATTCGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCTTTCTTGGCTACTTCACAAGAGTATAAGAGGATGATGCCTGGAAGAATCATTGGTGTTAGTGTTGATTCTTCTGGAAAGCCAGCTTTGAGGATGGCTATGCAAACTCGGGAGCAGCATATCCGTAGGGATAAGGCTACTAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCCATGTATGCTGTATATCATGGACCTGAAGGCCTTAAGGCTATTGCACAAAGGGTTCATGGTCTTGCTGGGGTATTTGCTTTGGGACTAAAGAAACTTGGAACAGTGGAAGTTCAGGATCTTGGCTTCTTTGATACTGTGAAGGTTAAGACTTCAAATGCCAAAGCAATTGCAGATGCTGCTGTCAAAAGTGAAATCAATTTGAGAGTTGTAGATGGAAACACTATCACTGTTGCGTTTGATGAAACAACTACATTAGAGGATGTTGATAAGCTTTTCAAAGTTTTTGCCGGTGGCAAACCTGTCTCATTCACAGCTGCATCTCTTGCACCAGAATTTCAGAATGCAATTCCTTCTGGATTAGTTAGGGAGACTCCTTATTTGACACACCCTATCTTTAACACGTACCAAACTGAGCACGAGTTGTTGAGATACATTCATAGGCTACAATCAAAAGATCTCTCACTTTGCCATAGTATGATCCCACTTGGATCCTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCTGTGACATGGCCTAGCTTTACTGATATTCACCCTTTTGCACCAACTGAACAGGCTCAAGGTTATCAGGAAATGTTCGACAATTTGGGTGACCTGTTGTGTACCATCACTGGATTTGATTCCTTCTCTTTGCAACCAAATGCTGGTGCTGCTGGAGAATATGCTGGACTCATGGTTATTCGTGCATATCATATGTCAAGAGGTGACCACCACCGCAATGTCTGCATTATACCAGTCTCAGCACATGGTACAAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTCACCATAGGAACTGATGCCAAGGGAAACATTAACATTGAAGAATTGAAGAAGGCTGCTGAAACACATAAGGACAACTTATCTGCGTTCATGGTTACATATCCTTCAACTCATGGTGTTTATGAAGAAGGTATTGATGATATTTGCAAGATCATCCATGATAATGGAGGCCAAGTATACATGGATGGTGCCAACATGAATGCACAGGTGGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCACAAGACATTTTGCATTCCTCACGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACCTGGCACCATTTTTACCCTCACACCCTGTGGTGCCAACTGGTGGAATTCCTGCCCCTGAAAATGCTCAACCACTTGGTAGTATCTCAGCTGCACCTTGGGGATCAGCGCTCATATTGCCTATCTCTTACACATACATAGCCATGATGGGTTCTAAAGGACTCACTGATGCGTCAAAGATAGCCATTTTGAATGCAAACTACATGGCGAAACGTTTGGAGAGTTATTACCCGGTTCTTTTCCGTGGAGTCAACGGAACATGTGCTCATGAGTTCATTATTGACTTAAGAGGCTTTAAGAATACTGCTGGGATAGAGCCTGAAGATGTTGCGAAGCGTCTCATGGACTATGGATTTCATGGACCAACCATGTCATGGCCTGTGCCTGGTACACTCATGATTGAGCCTACTGAAAGTGAAAGCAAGGCTGAGTTGGATAGGTTTTGTGATGCTCTCATTTCCATTAGAAAAGAAATTGCTGAGATTGAGAAAGGAAATGCTGACGTTCACAACAATGTTCTTAAGGGGGCTCCTCATCCACCATCACTGCTCATGGCTGATGCATGGACAAAGCCATATTCCAGGGAATATGCAGCCTTCCCTGCTCCATGGCTCCGTGTTGCAAAGTTTTGGCCTACCAATGGACGTGTTGATAATGTGTATGGTGACCGCAACCTGATCTGCACCCTTCTCCCAGCATCACAGGCTGTTGAAGAACCAGCTGCTGCCACAGCATAA 3171 0.4264 MERARRLANRATLKRLLSEAKQNCKNESTTTTAPLPFSSSTRYVSSVSNSVFRNRGSNVFGRNSNVSRGVGGFHGSGSSTQSRSITVEALKPSDTFARRHNSATPEEQTKMAESCGFDHLDSLVDATVPKSIRLKEMKFNKFDAGLTEGQMIEHMKDLASKNKVFKSFIGMGYYNTHVPPVILRNILENPAWYTQYTPYQAEISQGRLESLLNFQTLITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGFELKVVVKDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHANEVKVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAIAQRVHGLAGVFALGLKKLGTVEVQDLGFFDTVKVKTSNAKAIADAAVKSEINLRVVDGNTITVAFDETTTLEDVDKLFKVFAGGKPVSFTAASLAPEFQNAIPSGLVRETPYLTHPIFNTYQTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPTEQAQGYQEMFDNLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHMSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNINIEELKKAAETHKDNLSAFMVTYPSTHGVYEEGIDDICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPENAQPLGSISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTCAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRKEIAEIEKGNADVHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAPWLRVAKFWPTNGRVDNVYGDRNLICTLLPASQAVEEPAAATA 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00423 1056 CDD GDC-P 568 963 IPR020581 GO:0004375|GO:0006546
Mepo4g00423 1056 FunFam glycine dehydrogenase (Decarboxylating), mitochondrial 607 846 - -
Mepo4g00423 1056 CDD GDC-P 148 525 IPR020581 GO:0004375|GO:0006546
Mepo4g00423 1056 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 79 1046 IPR020581 GO:0004375|GO:0006546
Mepo4g00423 1056 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 179 439 - -
Mepo4g00423 1056 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 90 1047 IPR003437 GO:0004375|GO:0006544
Mepo4g00423 1056 Gene3D Aspartate Aminotransferase, domain 1 859 994 IPR015422 GO:0003824
Mepo4g00423 1056 SUPERFAMILY PLP-dependent transferases 99 525 IPR015424 -
Mepo4g00423 1056 Gene3D - 607 858 IPR015421 GO:0003824
Mepo4g00423 1056 Gene3D - 179 439 IPR015421 GO:0003824
Mepo4g00423 1056 SUPERFAMILY PLP-dependent transferases 542 1041 IPR015424 -
Mepo4g00423 1056 Pfam Glycine cleavage system P-protein 99 525 IPR020581 GO:0004375|GO:0006546
Mepo4g00423 1056 Pfam Glycine cleavage system P-protein 542 818 IPR020581 GO:0004375|GO:0006546
Mepo4g00423 1056 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 856 994 - -
Mepo4g00423 1056 FunFam Glycine cleavage system P protein 432 521 - -
Mepo4g00423 1056 Gene3D Aspartate Aminotransferase, domain 1 168 521 IPR015422 GO:0003824
Mepo4g00423 1056 NCBIfam aminomethyl-transferring glycine dehydrogenase 99 1040 IPR003437 GO:0004375|GO:0006544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00423 Mepo-Chr4 6181618 6189932 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00423 K00281 - gmx:100819714 1910.58