Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08072 ATGGATGTCAGTGGCAATTCTCTTCCGTCTTCTGCACCTGATGGGGTAAAGAGAAAAGTATGCTATTTCTATGATCCTGAGGTTGGGAATTATTATTATGGCCAAGGTCATCCCATGAAGCCACATCGTATCCGCATGACACATGCCCTTCTTGCCCACTATGGATTGCTTCAGCACATGCAGGTCCACAAGCCTTTTCCTGCTAGAGACAGGGACCTTTGCCGTTTTCATGCTGATGATTATGTTTCATTTCTTCGAAGCATAACCCCTGAAACACAACAAGATCATATGAGACAACTCAAACGCTTTAATGTTGGTGAAGATTGTCCTGTCTTTGATGGCCTATACTCTTTCTGTCAAACTTATGCTGGAGGTTCAGTTGGTGGTGCTGTCAAGTTGAATCACGATCAATGTGATATTGCTGTTAACTGGGCTGGTGGACTGCATCATGCCAAGAAGTGTGAGGCTTCTGGATTTTGCTATGTTAATGATATAGTCCTTGCAATCTTAGAACTTCTTAAACAGCACGAGCGTGTTCTATACGTGGACATTGATATCCACCATGGAGATGGTGTGGAGGAAGCTTTCTACACTACCGACCGAGTCATGACTGTTTCTTTCCATAAATTTGGTGATTATTTTCCTGGTACCGGCGACTTGCGTGATATTGGATATGGAAAGGGAAAATACTACTCTCTTAATGTTCCACTTGATGACGGCATTGATGACGAGAGTTATCATTTGTTGTTCAAACCTTTAATCGGCAAAGTAATGGAAATCTTTAGGCCCGGCGCAGTTGTTCTCCAGTGTGGTGCAGACTCTTTATCTGGAGACAGGTTGGGATGCTTTAATCTTTCAATTAGGGGTCATGCAGAGTGTGTCAGATACATGAGATCATTCAATGTTCCCCTCTTGCTACTAGGTGGTGGCGGTTACACCATTCGGAATGTTGCTCGTTGTTGGTGCTATGAGACGGGAGTTGCTCTTGGAATAGAAGTTGATGACAAAATGCCAGAGCACGAGTATTATGAATATTTCGGTCCAGATTATACCCTTCATGTTGCCCCAAGTAACATGGAAAACAAAAATACCCGACATTTACTTGATAATATCCGATCTAAGCTACTTGAGAATCTTTCGAAGCTGCAACATGCTCCCAGTGTTCAATTTCAGGAAAGGCCTCCTGATTCTGATCTTGGAGAGGAATTTGACGATCATAAAGATAGAGATGAGCATTGGGATCCAGATTCTGACATGGACGTTGATGTTGAACGCGATATTCTCCAAAGCAAAGTCAAGAGAGAAATTGTTGAACCTCAGCTCAATGATCCGGAGGACCTGAAAAGAACTAGAGAGCACTCAAGGGTCTCGGATACTGATGTAGTTGAAACAAGCGTGAAGGCTTTAGATATTTGTTCTCAGCCAGTTGATGAAGATAATGTGAAAGATGAAGAGAATATTGTGACTGATTTGGCCAGAGAGACGGATCTGAAGTGA 1497 0.4282 MDVSGNSLPSSAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVHKPFPARDRDLCRFHADDYVSFLRSITPETQQDHMRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDLRDIGYGKGKYYSLNVPLDDGIDDESYHLLFKPLIGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPEHEYYEYFGPDYTLHVAPSNMENKNTRHLLDNIRSKLLENLSKLQHAPSVQFQERPPDSDLGEEFDDHKDRDEHWDPDSDMDVDVERDILQSKVKREIVEPQLNDPEDLKRTREHSRVSDTDVVETSVKALDICSQPVDEDNVKDEENIVTDLARETDLK 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08072 498 Gene3D Histone deacetylase domain 16 389 IPR037138 -
Mepo3g08072 498 PRINTS Histone deacetylase signature 103 120 IPR003084 GO:0004407|GO:0016575
Mepo3g08072 498 PRINTS Histone deacetylase signature 72 90 IPR003084 GO:0004407|GO:0016575
Mepo3g08072 498 PRINTS Histone deacetylase signature 241 259 IPR003084 GO:0004407|GO:0016575
Mepo3g08072 498 PRINTS Histone deacetylase signature 39 56 IPR003084 GO:0004407|GO:0016575
Mepo3g08072 498 PRINTS Histone deacetylase signature 224 237 IPR003084 GO:0004407|GO:0016575
Mepo3g08072 498 PRINTS Histone deacetylase signature 165 181 IPR003084 GO:0004407|GO:0016575
Mepo3g08072 498 PRINTS Histone deacetylase signature 124 144 IPR003084 GO:0004407|GO:0016575
Mepo3g08072 498 MobiDBLite consensus disorder prediction 385 419 - -
Mepo3g08072 498 SUPERFAMILY Arginase/deacetylase 18 382 IPR023696 -
Mepo3g08072 498 MobiDBLite consensus disorder prediction 438 462 - -
Mepo3g08072 498 PRINTS Histone deacetylase superfamily signature 178 193 IPR000286 -
Mepo3g08072 498 PRINTS Histone deacetylase superfamily signature 263 273 IPR000286 -
Mepo3g08072 498 PRINTS Histone deacetylase superfamily signature 146 169 IPR000286 -
Mepo3g08072 498 PANTHER HISTONE DEACETYLASE 2-RELATED 11 361 - -
Mepo3g08072 498 MobiDBLite consensus disorder prediction 438 460 - -
Mepo3g08072 498 PIRSF HDAC_I_euk 5 469 IPR003084 GO:0004407|GO:0016575
Mepo3g08072 498 MobiDBLite consensus disorder prediction 395 419 - -
Mepo3g08072 498 Pfam Histone deacetylase domain 37 325 IPR023801 -
Mepo3g08072 498 FunFam Histone deacetylase 16 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08072 Mepo-Chr3 93452590 93461524 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08072 K06067 - gmx:100795375 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g08072 3 93452590 93461524 Mepo3g08072 3 93452590 93461524 ECH